RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NCBP2-AS2Q69YL0 99 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 SCUBE3Q8IX30 993 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 TRAPPC12Q8WVT3 735 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 HTR3CQ8WXA8 447 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 HIC2Q96JB3 615 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 SPATA13Q96N96 652 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 CSPG4P5Q96PW8 444 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 KCTD15Q96SI1 283 aaPredicted RBP20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 PTTG2Q9NZH5 202 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 STK39Q9UEW8 545 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 KIAA1257Q9ULG3 409 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 TMCO1Q9UM00 188 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 CDY2AQ9Y6F7 541 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 CDY1Q9Y6F8 540 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 PAPSS1O43252 624 aaPredicted RBP20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 PYGLP06737 847 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 RPL5P46777 297 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 PKDCCQ504Y2 493 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 PPP1R26Q5T8A7 1209 aaPredicted RBP20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 NAPRTQ6XQN6 538 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 CMC1Q7Z7K0 106 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 TTC30AQ86WT1 665 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 LENG8Q96PV6 779 aaPredicted RBP20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 NT5C1AQ9BXI3 368 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 SLC4A5Q9BY07 1137 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 SNX15Q9NRS6 342 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 SYBUQ9NX95 663 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 PCDHGB4Q9UN71 923 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 PCDHGB5Q9Y5G0 923 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 DGKIO75912 1065 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 CCDC130P13994 396 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 GLDCP23378 1020 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 MAGEA12P43365 314 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 CCDC153Q494R4 210 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 METTL7BQ6UX53 244 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 RBM44Q6ZP01 1051 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 TNS4Q8IZW8 715 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 PLD6Q8N2A8 252 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 COLGALT1Q8NBJ5 622 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 AP4E1Q9UPM8 1137 aa20.07■□□□□ 0.8
PDLIM3-212ENST00000620787 ERVK-10P10266 1014 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 RANBP1P43487 201 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 LY6KQ17RY6 165 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 TMEM110Q86TL2 294 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 METTL25Q8N6Q8 603 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 ISL2Q96A47 359 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 OR52B2Q96RD2 323 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 B3GNT5Q9BYG0 378 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 EIF2B3Q9NR50 452 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 PICK1Q9NRD5 415 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 GTF2IRD1Q9UHL9 959 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 PRPF19Q9UMS4 504 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 HSPA4LO95757 839 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 GP5P40197 560 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 METTL21CQ5VZV1 264 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 C11orf84Q9BUA3 381 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 IRAK4Q9NWZ3 460 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 RAB26Q9ULW5 256 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 FZD1Q9UP38 647 aa20.06■□□□□ 0.8
PDLIM3-212ENST00000620787 SRCAPQ6ZRS2 3230 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CRTAMO95727 393 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CLPTM1O96005 669 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 EDNRBP24530 442 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 INHBCP55103 352 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CNGA3Q16281 694 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 BSPRYQ5W0U4 402 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CES3Q6UWW8 571 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 ISLR2Q6UXK2 745 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 DCLK2Q8N568 766 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CHST13Q8NET6 341 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 LGMNQ99538 433 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 RBM38Q9H0Z9 239 aaKnown RBP20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 VPS33BQ9H267 617 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 LZTS1Q9Y250 596 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 USP3Q9Y6I4 520 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 G3V2L1 256 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 PEX10O60683 326 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 DESP17661 470 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 PIK3R1P27986 724 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 MLH1P40692 756 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 GARSP41250 739 aaKnown RBP20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 PTPN9P43378 593 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 NUDT2P50583 147 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CLCN3P51790 818 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 ADGRE1Q14246 886 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 SLC10A6Q3KNW5 377 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 LCA5Q86VQ0 697 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 TICAM1Q8IUC6 712 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 WRNIP1Q96S55 665 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 CPNE1Q99829 537 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 Q9H521 79 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 HSFX1Q9UBD0 423 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 RIMS3Q9UJD0 308 aa20.05■□□□□ 0.8
PDLIM3-212ENST00000620787 ZSWIM8A7E2V4 1837 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 CITO14578 2027 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 SOWAHBA6NEL2 793 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 HACD1B0YJ81 288 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 C19orf81C9J6K1 198 aa20.04■□□□□ 0.8
PDLIM3-212ENST00000620787 AIM2O14862 343 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms