RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 PGBD4Q96DM1 585 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PIWIL1Q96J94 861 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 FAR2Q96K12 515 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 C16orf70Q9BSU1 422 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 LRMDAQ9H2I8 198 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PLGRKTQ9HBL7 147 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 KIAA1586Q9HCI6 787 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 SIX4Q9UIU6 781 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 CPSF3Q9UKF6 684 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 ABT1Q9ULW3 272 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PIN4Q9Y237 131 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 CFL2Q9Y281 166 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 ARL2BPQ9Y2Y0 163 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 WASF2Q9Y6W5 498 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 TCP11X1B4DZS4 312 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 MCF2LO15068 1137 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 TRMUO75648 421 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 ASS1P00966 412 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 OAS1P00973 400 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 MMP3P08254 477 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 GZMAP12544 262 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 NAGAP17050 411 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 NR4A1P22736 598 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 ECHS1P30084 290 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 SLC5A2P31639 672 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 RPL21P46778 160 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 NUMBP49757 651 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PPP2R2BQ00005 443 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 OGDHQ02218 1023 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PAN2Q504Q3 1202 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 FYB2Q5VWT5 728 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 DNAJC24Q6P3W2 148 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PLPPR4Q7Z2D5 763 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 SLC13A5Q86YT5 568 aaPredicted RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 ELMOD1Q8N336 334 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 ANKLE1Q8NAG6 615 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 JOSD2Q8TAC2 188 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 MGARPQ8TDB4 240 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 HSPH1Q92598 858 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 SNF8Q96H20 258 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 NIF3L1Q9GZT8 377 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 RNF39Q9H2S5 420 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PDZD7Q9H5P4 517 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 MLXIPLQ9NP71 852 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 DDX43Q9NXZ2 648 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 MTRF1LQ9UGC7 380 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 CYTH4Q9UIA0 394 aa5.72□□□□□ -1.49
CPNE4-214ENST00000617767 NOSIPQ9Y314 301 aaKnown RBP5.72□□□□□ -1.49
CPNE4-214ENST00000617767 PRUNE2Q8WUY3 3088 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 WDR91A4D1P6 747 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 MEIS3P2A8K0S8 358 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 BTNL10A8MVZ5 291 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 MAPK13O15264 365 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 AQP9O43315 295 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 DCTN3O75935 186 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 CTRB1P17538 263 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 BTF3P20290 206 aaKnown RBP5.71□□□□□ -1.49
CPNE4-214ENST00000617767 ALAS2P22557 587 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 ASPAP45381 313 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 SNRPFP62306 86 aaKnown RBP5.71□□□□□ -1.49
CPNE4-214ENST00000617767 LRRC14Q15048 493 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 ZNF618Q5T7W0 954 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 CTRB2Q6GPI1 263 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 SCYL2Q6P3W7 929 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 DSTYKQ6XUX3 929 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 DCDC5Q6ZRR9 648 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 ACOT1Q86TX2 421 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 TLK2Q86UE8 772 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 WDR49Q8IV35 697 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 GLIS1Q8NBF1 620 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 BCL7CQ8WUZ0 217 aaPredicted RBP5.71□□□□□ -1.49
CPNE4-214ENST00000617767 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 NDRG1Q92597 394 aaKnown RBP5.71□□□□□ -1.49
CPNE4-214ENST00000617767 HPDLQ96IR7 371 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 VPS35Q96QK1 796 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 FMO2Q99518 471 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 TMEM134Q9H6X4 195 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 MAN1C1Q9NR34 630 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 TMEM59LQ9UK28 342 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 SQORQ9Y6N5 450 aa5.71□□□□□ -1.49
CPNE4-214ENST00000617767 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.5
CPNE4-214ENST00000617767 MYADML2A6NDP7 307 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 LRRC72A6NJI9 287 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.71□□□□□ -1.5
CPNE4-214ENST00000617767 STRNO43815 780 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 GABBR2O75899 941 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 KRT1P04264 644 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 CD48P09326 243 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 IL32P24001 234 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 RFC1P35251 1148 aaPredicted RBP5.71□□□□□ -1.5
CPNE4-214ENST00000617767 HAAOP46952 286 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 RASSF2P50749 326 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 YARSP54577 528 aaKnown RBP5.71□□□□□ -1.5
CPNE4-214ENST00000617767 PTPN5P54829 565 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 GJA9P57773 515 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 KRT17Q04695 432 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 MGAT5Q09328 741 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 TRIM32Q13049 653 aa5.71□□□□□ -1.5
CPNE4-214ENST00000617767 TMEM132DQ14C87 1099 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms