RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 MATN2O00339 956 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 CBX6O95503 412 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 ETS2P15036 469 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 KLRC1P26715 233 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 DLG1Q12959 904 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 IL18Q14116 193 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 PKN1Q16512 942 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 GRTP1Q5TC63 336 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 SULT1C3Q6IMI6 304 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 USP17L6PQ6QN14 398 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 FAM240BA0A1B0GVZ2 78 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 SAGE2PA6NJ88 616 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 EPN2O95208 641 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 MAGEA12P43365 314 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 DEFA5Q01523 94 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 GRM4Q14833 912 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 PSMD5Q16401 504 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 PAGE2Q7Z2X7 111 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 OFCC1Q8IZS5 231 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 CLYBLQ8N0X4 340 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 MCFD2Q8NI22 146 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 ERMAPQ96PL5 475 aaPredicted RBP12.64□□□□□ -0.39
HLCS-207ENST00000612277 MND1Q9BWT6 205 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 ELL3Q9HB65 397 aaPredicted RBP12.64□□□□□ -0.39
HLCS-207ENST00000612277 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 POLR2EP19388 210 aaKnown RBP12.64□□□□□ -0.39
HLCS-207ENST00000612277 XIAPP98170 497 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 FRG1Q14331 258 aaKnown RBP12.64□□□□□ -0.39
HLCS-207ENST00000612277 TTLL4Q14679 1199 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 GPAT2Q6NUI2 795 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 SLC6A15Q9H2J7 730 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 PRDM8Q9NQV8 689 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 RASSF1Q9NS23 344 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 EXD2Q9NVH0 621 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 BARHL2Q9NY43 387 aa12.64□□□□□ -0.39
HLCS-207ENST00000612277 COL17A1Q9UMD9 1497 aaPredicted RBP12.64□□□□□ -0.39
HLCS-207ENST00000612277 PROCP04070 461 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 AP3S2P59780 193 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 BIKQ13323 160 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 EPHA7Q15375 998 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 TRIM74Q86UV6 250 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 TRIM73Q86UV7 250 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 REXO5Q96IC2 774 aaKnown RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 TMEM216Q9P0N5 145 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 COG5Q9UP83 839 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 CES2O00748 559 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 SEC22BO75396 215 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 C9P02748 559 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ANPEPP15144 967 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 PBLDP30039 288 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 SDC2P34741 201 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 HARS2P49590 506 aaKnown RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 PSME3P61289 254 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ZNF668Q96K58 619 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 UBP1Q9NZI7 540 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 C3orf18Q9UK00 162 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 TMEM5Q9Y2B1 443 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 CCDC189A1A4V9 331 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 GLP2RO95838 553 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 GYPCP04921 128 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 LCN1P1Q5VSP4 162 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 FBXO30Q8TB52 745 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 NAALADL1Q9UQQ1 740 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 TNNI3P19429 210 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 FOLH1Q04609 750 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 SLC20A2Q08357 652 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 MPP3Q13368 585 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 BOLA3Q53S33 107 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 RAVER2Q9HCJ3 691 aaKnown RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 IFRD1O00458 451 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 SLC26A4O43511 780 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 OR5F1O95221 314 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 IL18RAPO95256 599 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ALADP13716 330 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 PKNOX1P55347 436 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms