RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ZNF280BQ86YH2 543 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 OXNAD1Q96HP4 312 aaPredicted RBP13.99□□□□□ -0.17
NEK3-205ENST00000610828 HHIPL1Q96JK4 782 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 SLC13A1Q9BZW2 595 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 MOCS1Q9NZB8 636 aa13.99□□□□□ -0.17
NEK3-205ENST00000610828 SRGAP2BP0DMP2 458 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 PAX3P23760 479 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 SLC5A3P53794 718 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 CDHR3Q6ZTQ4 885 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 RTN4RL1Q86UN2 441 aaPredicted RBP13.98□□□□□ -0.17
NEK3-205ENST00000610828 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 PTPRN2Q92932 1015 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 MTBPQ96DY7 904 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 SIK2Q9H0K1 926 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 RGS18Q9NS28 235 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 SYBUQ9NX95 663 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 SQORQ9Y6N5 450 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 NUP205Q92621 2012 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 RFPL1O75677 317 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 RASSF9O75901 435 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 DDHD2O94830 711 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 DHRS4L1P0CG22 281 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 TYMPP19971 482 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 MX2P20592 715 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 NOGQ13253 232 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 SMAD1Q15797 465 aaKnown RBP13.98□□□□□ -0.17
NEK3-205ENST00000610828 SLC39A12Q504Y0 691 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 STEAP4Q687X5 459 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
NEK3-205ENST00000610828 C4orf50Q6ZRC1 276 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 CELF6Q96J87 481 aaKnown RBP13.98□□□□□ -0.17
NEK3-205ENST00000610828 ECT2Q9H8V3 914 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 NPHS2Q9NP85 383 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 SRRDQ9UH36 339 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 USH1CQ9Y6N9 552 aa13.98□□□□□ -0.17
NEK3-205ENST00000610828 USP12O75317 370 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 PGAM1P18669 254 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 HNRNPH1P31943 449 aaKnown RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 GARSP41250 739 aaKnown RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 ZNF135P52742 658 aaPredicted RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 OVGP1Q12889 678 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 BNIP1Q12981 228 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 MBTPS1Q14703 1052 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 CRYMQ14894 314 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 CLLU1OSQ5K130 101 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 BTBD8Q5XKL5 378 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SLC24A5Q71RS6 500 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SCML4Q8N228 414 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 CDKL2Q92772 493 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 HDAC11Q96DB2 347 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 TRIM62Q9BVG3 475 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 ABCC13Q9NSE7 274 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 PCMTD2Q9NV79 361 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SLC17A6Q9P2U8 582 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 PTPRDP23468 1912 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 HMX2A2RU54 273 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 ZNF189O75820 626 aaPredicted RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 EOMESO95936 686 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 OR1G1P47890 313 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SERPINB9P50453 376 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 GALNT2Q10471 571 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 ZBTB17Q13105 803 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 MAP3K21Q5TCX8 1036 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 CYS1Q717R9 158 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 CHSY1Q86X52 802 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 CCNJLQ8IV13 435 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SCN4BQ8IWT1 228 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 OR52K1Q8NGK4 314 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 APBB2Q92870 758 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 GORASP1Q9BQQ3 440 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 BRD8Q9H0E9 1235 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 KLC4Q9NSK0 619 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 ABI2Q9NYB9 513 aaPredicted RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 SFMBT1Q9UHJ3 866 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 PRG3Q9Y2Y8 225 aaPredicted RBP13.97□□□□□ -0.17
NEK3-205ENST00000610828 NLRC5Q86WI3 1866 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 SHROOM3Q8TF72 1996 aa13.97□□□□□ -0.17
NEK3-205ENST00000610828 IRAK2O43187 625 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
NEK3-205ENST00000610828 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.17
NEK3-205ENST00000610828 BGNP21810 368 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 ALDH3A1P30838 453 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 SERPINB4P48594 390 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 PGFP49763 221 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 NCALDP61601 193 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 CES3Q6UWW8 571 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 TBC1D1Q86TI0 1168 aaPredicted RBP13.96□□□□□ -0.17
NEK3-205ENST00000610828 NDUFAF2Q8N183 169 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 DNAAF3Q8N9W5 541 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 ANKLE1Q8NAG6 615 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 RAET1EQ8TD07 263 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 C10orf82Q8WW14 230 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms