RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	KRT9	P35527	623 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	CSK	P41240	450 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	CTSO	P43234	321 aa	Predicted RBP	13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	JAM2	P57087	298 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	RAPGEF1	Q13905	1077 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	ARID5B	Q14865	1188 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	NCAPH	Q15003	741 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	DUOXA1	Q1HG43	343 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	OR6B2	Q6IFH4	312 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	ZNF683	Q8IZ20	524 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	APCDD1	Q8J025	514 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	LGI2	Q8N0V4	545 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	OR52K2	Q8NGK3	314 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	IGSF8	Q969P0	613 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	ALG14	Q96F25	216 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	NPY6R	Q99463	290 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	DDX50	Q9BQ39	737 aa	Known RBP	13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	STK33	Q9BYT3	514 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	TMEM9B	Q9NQ34	198 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	FANCL	Q9NW38	375 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	DDIT4	Q9NX09	232 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	SLCO1B1	Q9Y6L6	691 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	CABIN1	Q9Y6J0	2220 aa		13.21	□□□□□ -0.29
FKRP-223	ENST00000600872	MAP1B	P46821	2468 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	ITIH6	Q6UXX5	1313 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CHD5	Q8TDI0	1954 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	EPG5	Q9HCE0	2579 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	LRRC10B	A6NIK2	292 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	GIPC1	O14908	333 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	SYNCRIP	O60506	623 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	GJB3	O75712	270 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	APOE	P02649	317 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	ATP5B	P06576	529 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	ZNF18	P17022	549 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CHRNB2	P17787	502 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	POLR2E	P19388	210 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	MAOB	P27338	520 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PML	P29590	882 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	NOS2	P35228	1153 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	DPP6	P42658	865 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	BPIFB4	P59827	614 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	RPS14	P62263	151 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	NOMO3	P69849	1222 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CDK17	Q00537	523 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	E2F5	Q15329	346 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PLEKHG6	Q3KR16	790 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	C5orf22	Q49AR2	442 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	FNDC3B	Q53EP0	1204 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	C2CD6	Q53TS8	623 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PITRM1	Q5JRX3	1037 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CXorf57	Q6NSI4	855 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	FBXL22	Q6P050	247 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	C14orf80	Q86SX3	495 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CHSY1	Q86X52	802 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CIR1	Q86X95	450 aa	Predicted RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CACUL1	Q86Y37	369 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	XYLT1	Q86Y38	959 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CARNMT1	Q8N4J0	409 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	ZNF557	Q8N988	423 aa	Predicted RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	KDM1B	Q8NB78	822 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	CADM4	Q8NFZ8	388 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PRCC	Q92733	491 aa	Predicted RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PGAP3	Q96FM1	320 aa	Predicted RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	GPR174	Q9BXC1	333 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	VPS16	Q9H269	839 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PIGV	Q9NUD9	493 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	TMEM59L	Q9UK28	342 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	NOCT	Q9UK39	431 aa	Known RBP	13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	SLC6A14	Q9UN76	642 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	PLA2G4C	Q9UP65	541 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	DOCK9	Q9BZ29	2069 aa		13.2	□□□□□ -0.3
FKRP-223	ENST00000600872	METTL12	A8MUP2	240 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	ZBTB24	O43167	697 aa	Predicted RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	MME	P08473	750 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	MZF1	P28698	734 aa	Predicted RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	CCR1	P32246	355 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	ACSL1	P33121	698 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	SCNN1A	P37088	669 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	MATK	P42679	507 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	PLK1	P53350	603 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	AUH	Q13825	339 aa	Known RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	C9orf64	Q5T6V5	341 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	TAF3	Q5VWG9	929 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	PIP4P1	Q86T03	277 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	CCAR2	Q8N163	923 aa	Known RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	ATP6V0D2	Q8N8Y2	350 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	TMEM35B	Q8NCS4	154 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	OR2I1P	Q8NGU4	316 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	CEP76	Q8TAP6	659 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	SLC20A1	Q8WUM9	679 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	FOXJ1	Q92949	421 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	NOX5	Q96PH1	765 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	GBP4	Q96PP9	640 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	FAM129B	Q96TA1	746 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	ORAI3	Q9BRQ5	295 aa		13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	NUSAP1	Q9BXS6	441 aa	Known RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.19	□□□□□ -0.3
FKRP-223	ENST00000600872	ARHGEF38	Q9NXL2	777 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms