RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 LINC00271P0C7V0 271 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 ATP2A2P16615 1042 aaKnown RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 ATP5C1P36542 298 aaKnown RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 ARL4CP56559 192 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 PRKD1Q15139 912 aaPredicted RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 KYNUQ16719 465 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 MANEALQ5VSG8 457 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 LRRC31Q6UY01 552 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 LRRC49Q8IUZ0 686 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 NAT8LQ8N9F0 302 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 ZNF512Q96ME7 567 aaPredicted RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 LBHD1Q9BQE6 289 aaPredicted RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 PPARGC1AQ9UBK2 798 aaKnown RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 MAGED2Q9UNF1 606 aaPredicted RBP20.64■□□□□ 0.89
PNKP-214ENST00000600573 IRAK3Q9Y616 596 aa20.64■□□□□ 0.89
PNKP-214ENST00000600573 MKI67P46013 3256 aaKnown RBP20.63■□□□□ 0.89
PNKP-214ENST00000600573 MSI1O43347 362 aaKnown RBP20.63■□□□□ 0.89
PNKP-214ENST00000600573 TLL1O43897 1013 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 MFSD11O43934 449 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 AGTP01019 485 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 IGLV3-27P01718 113 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 HMGA1P17096 107 aaKnown RBP20.63■□□□□ 0.89
PNKP-214ENST00000600573 BMPR1AP36894 532 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 MAGEA6P43360 314 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 HIF1AQ16665 826 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 HECTD3Q5T447 861 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 COL13A1Q5TAT6 717 aaPredicted RBP20.63■□□□□ 0.89
PNKP-214ENST00000600573 RTL10Q7L3V2 364 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 EPS8L3Q8TE67 593 aaKnown RBP20.63■□□□□ 0.89
PNKP-214ENST00000600573 EMILIN2Q9BXX0 1053 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 SIK2Q9H0K1 926 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 LRRC4CQ9HCJ2 640 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 CXXC1Q9P0U4 656 aaPredicted RBP20.63■□□□□ 0.89
PNKP-214ENST00000600573 CLUHO75153 1309 aa20.63■□□□□ 0.89
PNKP-214ENST00000600573 TLDC2A0PJX2 215 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 ZNF840PA6NDX5 716 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 SMIM23A6NLE4 172 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 TEX28O15482 410 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 OPHN1O60890 802 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 TCEA3O75764 348 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 HPDP32754 393 aaPredicted RBP20.62■□□□□ 0.89
PNKP-214ENST00000600573 FDFT1P37268 417 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 BASP1P80723 227 aaKnown RBP20.62■□□□□ 0.89
PNKP-214ENST00000600573 UBE3AQ05086 875 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 GALNT2Q10471 571 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
PNKP-214ENST00000600573 CCDC149Q6ZUS6 474 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 KLHL23Q8NBE8 558 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 HDAC11Q96DB2 347 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 C9orf72Q96LT7 481 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 SERPINB12Q96P63 405 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 VAT1Q99536 393 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 CCDC77Q9BR77 488 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 NUDT5Q9UKK9 219 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 HS3ST4Q9Y661 456 aa20.62■□□□□ 0.89
PNKP-214ENST00000600573 SLC12A8A0AV02 714 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 CXCL14O95715 111 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 ADH1AP07327 375 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 ATP1A2P50993 1020 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 MAGOHP61326 146 aaKnown RBP20.61■□□□□ 0.89
PNKP-214ENST00000600573 PPP2R2AP63151 447 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 PPIDQ08752 370 aaKnown RBP20.61■□□□□ 0.89
PNKP-214ENST00000600573 STAT4Q14765 748 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 ANKRD22Q5VYY1 191 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 RWDD4Q6NW29 188 aaKnown RBP20.61■□□□□ 0.89
PNKP-214ENST00000600573 LEKR1Q6ZMV7 388 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 AZIN2Q96A70 460 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 PRDM12Q9H4Q4 367 aa20.61■□□□□ 0.89
PNKP-214ENST00000600573 A0A087WUV0 522 aaPredicted RBP20.6■□□□□ 0.89
PNKP-214ENST00000600573 A0A0A0MRY4 1105 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 E9PAM4 449 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 ALOX15BO15296 676 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 SRGAP2BP0DMP2 458 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 ATP5DP30049 168 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 GNGT1P63211 74 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 CDK16Q00536 496 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 AP1B1Q10567 949 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 PDIA2Q13087 525 aaKnown RBP20.6■□□□□ 0.89
PNKP-214ENST00000600573 B4GALNT4Q76KP1 1039 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 TMC7Q7Z402 723 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 CCNYQ8ND76 341 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 PSMG2Q969U7 264 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 SPATA13Q96N96 652 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 RAB6BQ9NRW1 208 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 XPO7Q9UIA9 1087 aaKnown RBP20.6■□□□□ 0.89
PNKP-214ENST00000600573 INSL5Q9Y5Q6 135 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 TMEM63AO94886 807 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 RB1P06400 928 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 TSHRP16473 764 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 DNAJB2P25686 324 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 SARNPP82979 210 aaKnown RBP20.6■□□□□ 0.89
PNKP-214ENST00000600573 TWF1Q12792 350 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 KCNJ11Q14654 390 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 ARHGEF18Q6ZSZ5 1173 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 DNAJB7Q7Z6W7 309 aaPredicted RBP20.6■□□□□ 0.89
PNKP-214ENST00000600573 PDIK1LQ8N165 341 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 MCUQ8NE86 351 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 P2RY11Q96G91 374 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 NACA2Q9H009 215 aa20.6■□□□□ 0.89
PNKP-214ENST00000600573 CNOT10Q9H9A5 744 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms