RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 RABGAP1LQ5R372 815 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 PLA2G2CQ5R387 149 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 MMS22LQ6ZRQ5 1243 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 CACUL1Q86Y37 369 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 ZNF366Q8N895 744 aa23.36■■□□□ 1.33
CCDC9-204ENST00000599398 PRMT1Q99873 361 aaKnown RBP23.36■■□□□ 1.33
CCDC9-204ENST00000599398 MKRN2Q9H000 416 aaKnown RBP23.36■■□□□ 1.33
CCDC9-204ENST00000599398 SEPT11Q9NVA2 429 aaKnown RBP23.36■■□□□ 1.33
CCDC9-204ENST00000599398 IGHV1OR15-9A0A0B4J2B8 117 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TEX33O43247 280 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 AP5Z1O43299 807 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 GDF9O60383 454 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 CYP1A1P04798 512 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TFE3P19532 575 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-204ENST00000599398 CSKP41240 450 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 DEUP1Q05D60 604 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 MTA1Q13330 715 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 PTPRNQ16849 979 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 FILIP1LQ4L180 1135 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 OTUD1Q5VV17 481 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TCEAL6Q6IPX3 200 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TRIM72Q6ZMU5 477 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 CIR1Q86X95 450 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TMPRSS6Q8IU80 811 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 DEFB119Q8N690 84 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 SLC30A5Q8TAD4 765 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 NETO1Q8TDF5 533 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 PIGKQ92643 395 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TCEAL3Q969E4 200 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 SIPA1Q96FS4 1042 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 LMLNQ96KR4 655 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 RPRD1AQ96P16 312 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-204ENST00000599398 TBCBQ99426 244 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 SIK2Q9H0K1 926 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 WDCPQ9H6R7 721 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 CD93Q9NPY3 652 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 PIGVQ9NUD9 493 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 DLL3Q9NYJ7 618 aa23.35■■□□□ 1.33
CCDC9-204ENST00000599398 KIAA1522Q9P206 1035 aaPredicted RBP23.35■■□□□ 1.33
CCDC9-204ENST00000599398 PAGE1O75459 146 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 MOCS3O95396 460 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 FLT3P36888 993 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 GGCXP38435 758 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 PTGER3P43115 390 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 ST8SIA6P61647 398 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 SLC25A52Q3SY17 297 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 TTC39BQ5VTQ0 682 aaPredicted RBP23.34■■□□□ 1.33
CCDC9-204ENST00000599398 LYSMD4Q5XG99 296 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 FBXL22Q6P050 247 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 DGLUCYQ7Z3D6 616 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 PHLDB2Q86SQ0 1253 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 PRCCQ92733 491 aaPredicted RBP23.34■■□□□ 1.33
CCDC9-204ENST00000599398 C11orf70Q9BRQ4 267 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 FUCA2Q9BTY2 467 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 ADAM33Q9BZ11 813 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 TKTL2Q9H0I9 626 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 TMEM245Q9H330 911 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 RTN4Q9NQC3 1192 aaKnown RBP23.34■■□□□ 1.33
CCDC9-204ENST00000599398 METTL5Q9NRN9 209 aaKnown RBP23.34■■□□□ 1.33
CCDC9-204ENST00000599398 INTS6Q9UL03 887 aaKnown RBP23.34■■□□□ 1.33
CCDC9-204ENST00000599398 VANGL2Q9ULK5 521 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 PAXBP1Q9Y5B6 917 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 HS3ST4Q9Y661 456 aa23.34■■□□□ 1.33
CCDC9-204ENST00000599398 MUC22E2RYF6 1773 aaPredicted RBP23.34■■□□□ 1.33
CCDC9-204ENST00000599398 NDUFS2O75306 463 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 F9P00740 461 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 ASLP04424 464 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 ACADMP11310 421 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 MMP8P22894 467 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 NSFP46459 744 aaKnown RBP23.33■■□□□ 1.33
CCDC9-204ENST00000599398 CXCR3P49682 368 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 COPAP53621 1224 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 CENPCQ03188 943 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 AUHQ13825 339 aaKnown RBP23.33■■□□□ 1.33
CCDC9-204ENST00000599398 PITRM1Q5JRX3 1037 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 SPDYCQ5MJ68 293 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 BRMS1LQ5PSV4 323 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 CCAR2Q8N163 923 aaKnown RBP23.33■■□□□ 1.33
CCDC9-204ENST00000599398 NT5C3BQ969T7 300 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 TTC17Q96AE7 1141 aa23.33■■□□□ 1.33
CCDC9-204ENST00000599398 LAMA1P25391 3075 aa23.33■■□□□ 1.32
CCDC9-204ENST00000599398 PI4KAP42356 2102 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 TNRC6BQ9UPQ9 1833 aaKnown RBP23.32■■□□□ 1.32
CCDC9-204ENST00000599398 A0A1B0GVM2 712 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 TCAF2A6NFQ2 919 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 ADCY5O95622 1261 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 PTMSP20962 102 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 ATXN1P54253 815 aaKnown RBP23.32■■□□□ 1.32
CCDC9-204ENST00000599398 CAMK2GQ13555 558 aaPredicted RBP23.32■■□□□ 1.32
CCDC9-204ENST00000599398 OR2T3Q8NH03 318 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 IGSF8Q969P0 613 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 PGAP3Q96FM1 320 aaPredicted RBP23.32■■□□□ 1.32
CCDC9-204ENST00000599398 CFAP57Q96MR6 1250 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 PCDHB18PQ96TA0 734 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 RXFP3Q9NSD7 469 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 SUN2Q9UH99 717 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 TMEM59LQ9UK28 342 aa23.32■■□□□ 1.32
CCDC9-204ENST00000599398 CCDC172P0C7W6 258 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 PDGFRAP16234 1089 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 FERP16591 822 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms