RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 GNSP15586 552 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 ATXN3P54252 364 aaPredicted RBP23.81■■□□□ 1.4
SSBP4-205ENST00000598159 ZBTB16Q05516 673 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 N4BP2L1Q5TBK1 243 aaPredicted RBP23.81■■□□□ 1.4
SSBP4-205ENST00000598159 OLFML1Q6UWY5 402 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 RBM43Q6ZSC3 357 aaKnown RBP23.81■■□□□ 1.4
SSBP4-205ENST00000598159 SLC26A9Q7LBE3 791 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 CHSY1Q86X52 802 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 KDM1BQ8NB78 822 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 DNASE2BQ8WZ79 361 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 GPR174Q9BXC1 333 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 NAA15Q9BXJ9 866 aaKnown RBP23.81■■□□□ 1.4
SSBP4-205ENST00000598159 STK33Q9BYT3 514 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 CAPN10Q9HC96 672 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 RRN3Q9NYV6 651 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 INTS6Q9UL03 887 aaKnown RBP23.81■■□□□ 1.4
SSBP4-205ENST00000598159 FHOD1Q9Y613 1164 aa23.81■■□□□ 1.4
SSBP4-205ENST00000598159 METTL12A8MUP2 240 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 GOLGA6L22H0YM25 854 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 GRAP2O75791 330 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 TPM2P07951 284 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 SYPP08247 313 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 CYP11B1P15538 503 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 CSRP1P21291 193 aaKnown RBP23.8■■□□□ 1.4
SSBP4-205ENST00000598159 CDH5P33151 784 aaPredicted RBP23.8■■□□□ 1.4
SSBP4-205ENST00000598159 NOS2P35228 1153 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 CSKP41240 450 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 UAP1L1Q3KQV9 507 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 PTPN20Q4JDL3 420 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 FSCBQ5H9T9 825 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 ZNF366Q8N895 744 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 GPT2Q8TD30 523 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 PCED1AQ9H1Q7 454 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 PLCB1Q9NQ66 1216 aa23.8■■□□□ 1.4
SSBP4-205ENST00000598159 ARHGAP33O14559 1287 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 SRPRAP08240 638 aaKnown RBP23.79■■□□□ 1.4
SSBP4-205ENST00000598159 MAPK8P45983 427 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 SLC12A1Q13621 1099 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 PITRM1Q5JRX3 1037 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 TTC39BQ5VTQ0 682 aaPredicted RBP23.79■■□□□ 1.4
SSBP4-205ENST00000598159 MYO19Q96H55 970 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 PRMT1Q99873 361 aaKnown RBP23.79■■□□□ 1.4
SSBP4-205ENST00000598159 TMEM51Q9NW97 253 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 NCOR2Q9Y618 2525 aa23.79■■□□□ 1.4
SSBP4-205ENST00000598159 SYNJ2BP-COX16A0A087WUM0 186 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 MEI4A8MW99 385 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 DAB1O75553 588 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 CEACAM1P13688 526 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 MAOBP27338 520 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 MATKP42679 507 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 GABRB2P47870 512 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 NOVA1P51513 510 aaKnown RBP23.78■■□□□ 1.4
SSBP4-205ENST00000598159 ARID5BQ14865 1188 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 RABGAP1LQ5R372 815 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 PSAPL1Q6NUJ1 521 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 C18orf8Q96DM3 657 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 VPS16Q9H269 839 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 TAB2Q9NYJ8 693 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 COX16Q9P0S2 106 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 ERVW-1Q9UQF0 538 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 LAMA1P25391 3075 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 ADAMTS9Q9P2N4 1935 aa23.78■■□□□ 1.4
SSBP4-205ENST00000598159 ASCC3Q8N3C0 2202 aaKnown RBP23.78■■□□□ 1.4
SSBP4-205ENST00000598159 M0QYT0 321 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 DNTTP04053 509 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 OXCT1P55809 520 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 RPS14P62263 151 aaKnown RBP23.77■■□□□ 1.4
SSBP4-205ENST00000598159 NME3Q13232 169 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 PLEKHG6Q3KR16 790 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 SH3PXD2AQ5TCZ1 1133 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 DCAF12L1Q5VU92 463 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 CDKAL1Q5VV42 579 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 SASS6Q6UVJ0 657 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 MMS22LQ6ZRQ5 1243 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 ERICH1Q86X53 443 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 MRGPRX3Q96LB0 322 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 PPP1R9BQ96SB3 815 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 GTPBP2Q9BX10 602 aaKnown RBP23.77■■□□□ 1.4
SSBP4-205ENST00000598159 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.77■■□□□ 1.43e-6■■■■□ 24.8
SSBP4-205ENST00000598159 SCML1Q9UN30 329 aa23.77■■□□□ 1.4
SSBP4-205ENST00000598159 MUC22E2RYF6 1773 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-205ENST00000598159 A0A1B0GTW7 788 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 TARSL2A2RTX5 802 aaKnown RBP23.76■■□□□ 1.39
SSBP4-205ENST00000598159 LSM8O95777 96 aaKnown RBP23.76■■□□□ 1.39
SSBP4-205ENST00000598159 SCNN1AP37088 669 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 PLK1P53350 603 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 ECT2LQ008S8 904 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 KRT31Q15323 416 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 HNRNPA1L2Q32P51 320 aaKnown RBP23.76■■□□□ 1.39
SSBP4-205ENST00000598159 FKBP15Q5T1M5 1219 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 ZNF776Q68DI1 518 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-205ENST00000598159 FAM124AQ86V42 546 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 CACUL1Q86Y37 369 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 CCAR2Q8N163 923 aaKnown RBP23.76■■□□□ 1.39
SSBP4-205ENST00000598159 HDDC3Q8N4P3 179 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 BTBD1Q9H0C5 482 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 RSPH9Q9H1X1 276 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-205ENST00000598159 FSCN3Q9NQT6 498 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 ANO10Q9NW15 660 aa23.76■■□□□ 1.39
SSBP4-205ENST00000598159 FANCLQ9NW38 375 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms