RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 SNX16P57768 344 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 SULT2A1Q06520 285 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 HLA-BQ31612 363 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 INAVAQ3KP66 663 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 SCUBE3Q8IX30 993 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 ZCCHC14Q8WYQ9 949 aaKnown RBP14.11□□□□□ -0.15
TRIM28-211ENST00000597968 IGSF8Q969P0 613 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 FAM149B1Q96BN6 582 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 ERLEC1Q96DZ1 483 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 MYO19Q96H55 970 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 BTN2A3PQ96KV6 586 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 THAP9Q9H5L6 903 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 ST7Q9NRC1 585 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 ASNSD1Q9NWL6 643 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 ADAMTS1Q9UHI8 967 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 SLC12A6Q9UHW9 1150 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 KLK13Q9UKR3 277 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 MUC22E2RYF6 1773 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-211ENST00000597968 ITIH6Q6UXX5 1313 aa14.11□□□□□ -0.15
TRIM28-211ENST00000597968 DKK1O94907 266 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 LUC7L3O95232 432 aaKnown RBP14.1□□□□□ -0.15
TRIM28-211ENST00000597968 IGLV3-25P01717 112 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 BMP6P22004 513 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 NNMTP40261 264 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 SGSHP51688 502 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 YWHAZP63104 245 aaKnown RBP14.1□□□□□ -0.15
TRIM28-211ENST00000597968 RACK1P63244 317 aaKnown RBP14.1□□□□□ -0.15
TRIM28-211ENST00000597968 FAM193AP78312 1265 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-211ENST00000597968 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 KLHL10Q6JEL2 608 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 RFWD3Q6PCD5 774 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 OR2I1PQ8NGU4 316 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 CLEC4CQ8WTT0 213 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 ZNF606Q8WXB4 792 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 KAT5Q92993 513 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 BIRC7Q96CA5 298 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 KREMEN1Q96MU8 473 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 MIS12Q9H081 205 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 PABPC3Q9H361 631 aaKnown RBP14.1□□□□□ -0.15
TRIM28-211ENST00000597968 C6orf106Q9H6K1 298 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-211ENST00000597968 TM9SF3Q9HD45 589 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 TJP2Q9UDY2 1190 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 ANKRD6Q9Y2G4 727 aa14.1□□□□□ -0.15
TRIM28-211ENST00000597968 DMXL2Q8TDJ6 3036 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 EDDM13A0A1B0GTR0 161 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 LRRC72A6NJI9 287 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 SRRM3A6NNA2 597 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 CDK4P11802 303 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 KRT5P13647 590 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 NUDT1P36639 197 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 CSKP41240 450 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 GRK6P43250 576 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 CCT8P50990 548 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 ECT2LQ008S8 904 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 BNC1Q01954 994 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 ACBD5Q5T8D3 534 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 ARHGEF19Q8IW93 802 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 CHCHD4Q8N4Q1 142 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 ATP6V0D2Q8N8Y2 350 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 WFDC5Q8TCV5 224 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 PRICKLE1Q96MT3 831 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 NOX5Q96PH1 765 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 SRRTQ9BXP5 876 aaKnown RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 INTS2Q9H0H0 1204 aaKnown RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 KDM4CQ9H3R0 1056 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-211ENST00000597968 NAALADL1Q9UQQ1 740 aa14.09□□□□□ -0.15
TRIM28-211ENST00000597968 ADAMTS9Q9P2N4 1935 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 GOLGA6L7A0A1B0GV03 622 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 A0A1B0GVT2 93 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 A0A1W2PPC4 97 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 KCNU1A8MYU2 1149 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 C10orf142B7Z368 130 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 VILLO15195 856 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 YKT6O15498 198 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 TRUB2O95900 331 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 ADH1BP00325 375 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CAPNS1P04632 268 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 GNA15P30679 374 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CCR1P32246 355 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CSNK1EP49674 416 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 PLK1P53350 603 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 RPS24P62847 133 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CST6Q15828 149 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 DCAF6Q58WW2 860 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 PITRM1Q5JRX3 1037 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 EFHC1Q5JVL4 640 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 RNF219Q5W0B1 726 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 KIAA0895LQ68EN5 471 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CCNI2Q6ZMN8 369 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 TAC4Q86UU9 113 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 FAM124AQ86V42 546 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 PROSER1Q86XN7 944 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 GALNT15Q8N3T1 639 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CARNMT1Q8N4J0 409 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 OR2T34Q8NGX1 318 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 RHBDD1Q8TEB9 315 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms