RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 MRPS31Q92665 395 aaKnown RBP21.41■■□□□ 1.02
PNKP-203ENST00000593946 SLC22A12Q96S37 553 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 CORO1BQ9BR76 489 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 KLC2Q9H0B6 622 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 PPARGC1AQ9UBK2 798 aaKnown RBP21.41■■□□□ 1.02
PNKP-203ENST00000593946 VANGL2Q9ULK5 521 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 NYNRINQ9P2P1 1898 aaKnown RBP21.41■■□□□ 1.02
PNKP-203ENST00000593946 PDE4DIPQ5VU43 2346 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 PER2O15055 1255 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 KCNN4O15554 427 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 HNRNPA1P09651 372 aaKnown RBP eCLIP21.41■■□□□ 1.02
PNKP-203ENST00000593946 BMP8BP34820 402 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 HARS2P49590 506 aaKnown RBP21.41■■□□□ 1.02
PNKP-203ENST00000593946 CALCOCO2Q13137 446 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 PRKD1Q15139 912 aaPredicted RBP21.41■■□□□ 1.02
PNKP-203ENST00000593946 RAP1GAP2Q684P5 730 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 ADGRD2Q7Z7M1 963 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 TP53INP2Q8IXH6 220 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 NETO2Q8NC67 525 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 AZIN2Q96A70 460 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 FMO2Q99518 471 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 TRPC7Q9HCX4 862 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 GKN1Q9NS71 199 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 HCFC2Q9Y5Z7 792 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 CHD5Q8TDI0 1954 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 WASH4PA8MWX3 477 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 PPP1R12AO14974 1030 aaPredicted RBP21.4■■□□□ 1.02
PNKP-203ENST00000593946 NCAM2O15394 837 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 RBM10P98175 930 aaKnown RBP21.4■■□□□ 1.02
PNKP-203ENST00000593946 CYP4F8P98187 520 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 GPS1Q13098 491 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 P3H1Q32P28 736 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 FBXL22Q6P050 247 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 LRRC31Q6UY01 552 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 NLRP14Q86W24 1093 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 RTL3Q8N8U3 475 aaKnown RBP21.4■■□□□ 1.02
PNKP-203ENST00000593946 BBOF1Q8ND07 529 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 GDPD5Q8WTR4 605 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 LRRN4Q8WUT4 740 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 GDAP1L1Q96MZ0 367 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 CYP2S1Q96SQ9 504 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 LGMNQ99538 433 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 ADAM7Q9H2U9 754 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 PRDM12Q9H4Q4 367 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 SLC28A3Q9HAS3 691 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 HCFC1R1Q9NWW0 138 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 DPP7Q9UHL4 492 aa21.4■■□□□ 1.02
PNKP-203ENST00000593946 NRG2O14511 850 aaPredicted RBP21.39■■□□□ 1.01
PNKP-203ENST00000593946 ACSL4O60488 711 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 KLKB1P03952 638 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 MBL2P11226 248 aaPredicted RBP21.39■■□□□ 1.01
PNKP-203ENST00000593946 RPL22P35268 128 aaKnown RBP21.39■■□□□ 1.01
PNKP-203ENST00000593946 NRLP54845 237 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 GALNT2Q10471 571 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 RHBDF2Q6PJF5 856 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 CHSY1Q86X52 802 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 LZTR1Q8N653 840 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 ARL14EPQ8N8R7 260 aaPredicted RBP21.39■■□□□ 1.01
PNKP-203ENST00000593946 GCNAQ96QF7 691 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 FUT8Q9BYC5 575 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 ZYG11BQ9C0D3 744 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 ATXN3LQ9H3M9 355 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 ZDHHC7Q9NXF8 308 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 MPP6Q9NZW5 540 aa21.39■■□□□ 1.01
PNKP-203ENST00000593946 A0A1W2PRU2 124 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 EPOPA6NHQ4 379 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 DRGXA6NNA5 263 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 DNALI1O14645 258 aaPredicted RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 FGF19O95750 216 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 MYL4P12829 197 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 VAV1P15498 845 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 PTPN2P17706 415 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 HDCP19113 662 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 MX2P20592 715 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 TACR2P21452 398 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 CORO1AP31146 461 aaKnown RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 SLC11A2P49281 568 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 IRAK1P51617 712 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 ITGA8P53708 1063 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 CAV1Q03135 178 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 FAM133BQ5BKY9 247 aaKnown RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 IZUMO3Q5VZ72 239 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 HEATR6Q6AI08 1181 aaKnown RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 RBM23Q86U06 439 aaKnown RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 IGSF8Q969P0 613 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 LRRC45Q96CN5 670 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 HDAC11Q96DB2 347 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 GOLGA6L7A0A1B0GV03 622 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 POU2F2P09086 479 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 RHOQP17081 205 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 PFKLP17858 780 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 CCR2P41597 374 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 TNNT3P45378 269 aaPredicted RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 C5orf22Q49AR2 442 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 DENND1CQ8IV53 801 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 ARHGAP12Q8IWW6 846 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 TDHQ8IZJ6 230 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 MAB21L3Q8N8X9 362 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 HTR3CQ8WXA8 447 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 WBP2Q969T9 261 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms