RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TAPT1Q6NXT6 567 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 AGMOQ6ZNB7 445 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ACAD11Q709F0 780 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 KDELC2Q7Z4H8 507 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TMEM145Q8NBT3 493 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 KCNV2Q8TDN2 545 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 LRRC8CQ8TDW0 803 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.44□□□□□ -1.381e-10■□□□□ 10.9
SMAD4-212ENST00000591126 MLPHQ9BV36 600 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 GSDMCQ9BYG8 508 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ASPSCR1Q9BZE9 553 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 VCX3BQ9H321 246 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SMYD2Q9NRG4 433 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ORC6Q9Y5N6 252 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 OR5K4A6NMS3 321 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 GOLGA8KD6RF30 607 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 F8VP50 259 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 MGEA5O60502 916 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 NOL3O60936 208 aaKnown RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ATP9AO75110 1047 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 FDPSP14324 419 aaKnown RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 MAGEA10P43363 369 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SCNN1BP51168 640 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TAS2R50P59544 299 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TAF10Q12962 218 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RAB33AQ14088 237 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 FAM26DQ5JW98 314 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 DNAJB7Q7Z6W7 309 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 DENND1CQ8IV53 801 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RERGQ96A58 199 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TTC17Q96AE7 1141 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RNF25Q96BH1 459 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ZDHHC6Q9H6R6 413 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ABHD10Q9NUJ1 306 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TXLNGQ9NUQ3 528 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SOHLH2Q9NX45 425 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 HCN3Q9P1Z3 774 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 AMACRQ9UHK6 382 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 HEMK1Q9Y5R4 338 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 GSTA4O15217 222 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CLASP2O75122 1294 aaKnown RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 APBB3O95704 486 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ITIH2P19823 946 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CHRM3P20309 590 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 JAK1P23458 1154 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CLEC16AQ2KHT3 1053 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ANKRD20A8PQ5CZ79 823 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ARHGAP17Q68EM7 881 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CHMP1BQ7LBR1 199 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TTC7BQ86TV6 843 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 IFNLR1Q8IU57 520 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 KRT78Q8N1N4 520 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SRFBP1Q8NEF9 429 aaKnown RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 FAM71BQ8TC56 605 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ZNF606Q8WXB4 792 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 DNASE1L2Q92874 299 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SLC22A18Q96BI1 424 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CFAP36Q96G28 342 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CYTH2Q99418 400 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 EBNA1BP2Q99848 306 aaKnown RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ROGDIQ9GZN7 287 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CASZ1Q86V15 1759 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 EXOC1LA0A1B0GW35 172 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 EML1O00423 815 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 EIF3HO15372 352 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 KCNJ13O60928 360 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 TNFP01375 233 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CHRNA1P02708 482 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SLC35G4P0C7Q5 338 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 EN2P19622 333 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RPL3P39023 403 aaKnown RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 EPHB4P54760 987 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RGS1Q08116 209 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CNTN1Q12860 1018 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 CDH17Q12864 832 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 FAM83EQ2M2I3 478 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 PLEKHG4Q58EX7 1191 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 AGAP9Q5VTM2 703 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RALGPS2Q86X27 583 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 DEFB106AQ8N104 65 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 SNX31Q8N9S9 440 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RXFP2Q8WXD0 754 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 FAM161BQ96MY7 647 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 ZNF599Q96NL3 588 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 PCBD2Q9H0N5 130 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 RBM22Q9NW64 420 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMAD4-212ENST00000591126 VAV3Q9UKW4 847 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 PCDHGC5Q9Y5F6 944 aa6.44□□□□□ -1.38
SMAD4-212ENST00000591126 MARF1Q9Y4F3 1742 aaKnown RBP6.43□□□□□ -1.38
SMAD4-212ENST00000591126 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-212ENST00000591126 VIPP01282 170 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 ITGAVP06756 1048 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 GALTP07902 379 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 ELFN1P0C7U0 828 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 COX7A2P14406 83 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 HOXA9P31269 272 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 MATKP42679 507 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 CXCL12P48061 93 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 VPS41P49754 854 aa6.43□□□□□ -1.38
SMAD4-212ENST00000591126 ARHGDIAP52565 204 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms