RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DMC1Q14565 340 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 HSF5Q4G112 596 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 FAM102AQ5T9C2 384 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 SH3PXD2AQ5TCZ1 1133 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 FYB2Q5VWT5 728 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 TRMT11Q7Z4G4 463 aaKnown RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 CCDC33Q8N5R6 958 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 CAMKK1Q8N5S9 505 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 ALLCQ8N6M5 410 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 ZBTB44Q8NCP5 570 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 ZNF397Q8NF99 534 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 NELL1Q92832 810 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 RNF34Q969K3 372 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 AZIN2Q96A70 460 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 TMA16Q96EY4 203 aaKnown RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 FCRL2Q96LA5 508 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 NAP1L5Q96NT1 182 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 SLC2A13Q96QE2 648 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 SLC2A11Q9BYW1 496 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 ZNF395Q9H8N7 513 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 DDIT4Q9NX09 232 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 COX16Q9P0S2 106 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 SLC12A6Q9UHW9 1150 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 STOML2Q9UJZ1 356 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 MMP17Q9ULZ9 603 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 GOLGA8SH3BPF8 625 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 TRIM24O15164 1050 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 GFRA3O60609 400 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 APBB3O95704 486 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 CHRNB2P17787 502 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 HOXA6P31267 233 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 CCR1P32246 355 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 NOS2P35228 1153 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 MATKP42679 507 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 KIR2DL1P43626 348 aaPredicted RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 GABRB2P47870 512 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 UBASH3AP57075 661 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 PITX1P78337 314 aaPredicted RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 FMO1Q01740 532 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 DMWDQ09019 674 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 C2CD6Q53TS8 623 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 ZC3H12AQ5D1E8 599 aaKnown RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 EOGTQ5NDL2 527 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 EMC10Q5UCC4 262 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 SDE2Q6IQ49 451 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 RFWD3Q6PCD5 774 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 LONP2Q86WA8 852 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 XYLT1Q86Y38 959 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 ZNF513Q8N8E2 541 aaPredicted RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 ATP6V0D2Q8N8Y2 350 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 IL17RCQ8NAC3 791 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 TXNDC5Q8NBS9 432 aaKnown RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 TSTD1Q8NFU3 115 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 SLC39A13Q96H72 371 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 BTN2A3PQ96KV6 586 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 HHIPQ96QV1 700 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 POLR3BQ9NW08 1133 aaPredicted RBP10.75□□□□□ -0.69
SDF2-208ENST00000589788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.75□□□□□ -0.69
SDF2-208ENST00000589788 RRN3Q9NYV6 651 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.75□□□□□ -0.69
SDF2-208ENST00000589788 STAP1Q9ULZ2 295 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 MYO6Q9UM54 1294 aa10.75□□□□□ -0.69
SDF2-208ENST00000589788 MYO18AQ92614 2054 aaKnown RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 GOLGA6L7A0A1B0GV03 622 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 PRR23AA6NEV1 266 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 ANTXRLA6NF34 631 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 M0QYT0 321 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 AP5Z1O43299 807 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 TBL1XO60907 577 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 LILRB5O75023 590 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 IGLV3-25P01717 112 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 LMNAP02545 664 aaKnown RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 CYP1A1P04798 512 aaPredicted RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 CISD3P0C7P0 127 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 ABCB4P21439 1286 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 HOXD9P28356 352 aaPredicted RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 CNR2P34972 360 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 NSFP46459 744 aaKnown RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 PXNP49023 591 aaPredicted RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 DGKEP52429 567 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 NME3Q13232 169 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 MTA1Q13330 715 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 NR1I3Q14994 352 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 E2F5Q15329 346 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 ASIC2Q16515 512 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 PIK3R6Q5UE93 754 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 MMS22LQ6ZRQ5 1243 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 ANKS1BQ7Z6G8 1248 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 WDR5BQ86VZ2 330 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 CHSY1Q86X52 802 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 CCDC117Q8IWD4 279 aaPredicted RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 HJURPQ8NCD3 748 aaPredicted RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 UCMAQ8WVF2 138 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 AGPAT1Q99943 283 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 POLMQ9NP87 494 aaPredicted RBP10.74□□□□□ -0.69
SDF2-208ENST00000589788 STIM2Q9P246 746 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 FBXO10Q9UK96 956 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms