RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DENND1AQ8TEH3 1009 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 EDEM1Q92611 657 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 FATE1Q969F0 183 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 TBC1D31Q96DN5 1066 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 TMEM209Q96SK2 561 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 LGMNQ99538 433 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 UNC93B1Q9H1C4 597 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 TLR8Q9NR97 1041 aaKnown RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 ABI2Q9NYB9 513 aaPredicted RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 KLHL8Q9P2G9 620 aaPredicted RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 CTNNAL1Q9UBT7 734 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 CHMP2BQ9UQN3 213 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 PRG3Q9Y2Y8 225 aaPredicted RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 COL4A4P53420 1690 aaPredicted RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 TDRD15B5MCY1 1934 aaKnown RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 KCNU1A8MYU2 1149 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 TBC1D4O60343 1298 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 ALDH1A2O94788 518 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 MT-ND3P03897 115 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 GALTP07902 379 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 SNRPAP09012 282 aaKnown RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 VAV1P15498 845 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 PGAM1P18669 254 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 PTPN3P26045 913 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 TUFMP49411 452 aaKnown RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 MLLT6P55198 1093 aaPredicted RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 WASHC5Q12768 1159 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 GPNMBQ14956 572 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 PKN2Q16513 984 aaKnown RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 HP1BP3Q5SSJ5 553 aaPredicted RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 FUT10Q6P4F1 479 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 PIGWQ7Z7B1 504 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 SCD5Q86SK9 330 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 ZNF567Q8N184 647 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 ATP6V0D2Q8N8Y2 350 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 CCDC197Q8NCU1 140 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 SCAMP5Q8TAC9 235 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 DCAKDQ8WVC6 231 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 OVCA2Q8WZ82 227 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 STAMBPL1Q96FJ0 436 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 SEC16BQ96JE7 1060 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 CABS1Q96KC9 395 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 TEKT5Q96M29 485 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 RHOBTB2Q9BYZ6 727 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 MAGEB5Q9BZ81 275 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 BFARQ9NZS9 450 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 PPARGC1AQ9UBK2 798 aaKnown RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 AAR2Q9Y312 384 aaKnown RBP10.67□□□□□ -0.7
VPS25-203ENST00000589520 BACE2Q9Y5Z0 518 aa10.67□□□□□ -0.7
VPS25-203ENST00000589520 A0A1W2PQH9 124 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 FAM159BA6NKW6 160 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 TBKBP1A7MCY6 615 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 FAM72CH0Y354 149 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 TYROBPO43914 113 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 CACNG3O60359 315 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 PAGE1O75459 146 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 ASMTLO95671 621 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 AP2A1O95782 977 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 VIMP08670 466 aaKnown RBP10.66□□□□□ -0.7
VPS25-203ENST00000589520 SRGAP2BP0DMP2 458 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 HAPLN1P10915 354 aaPredicted RBP10.66□□□□□ -0.7
VPS25-203ENST00000589520 CA4P22748 312 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 IFNAR2P48551 515 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 SLC11A1P49279 550 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 ALDH7A1P49419 539 aaKnown RBP10.66□□□□□ -0.7
VPS25-203ENST00000589520 GAD2Q05329 585 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 SLC18A2Q05940 514 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 IKBKEQ14164 716 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 ANO4Q32M45 955 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 USP41Q3LFD5 358 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 KBTBD12Q3ZCT8 623 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 SPANXN3Q5MJ09 141 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 FAM72AQ5TYM5 149 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 MANEALQ5VSG8 457 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 NAPEPLDQ6IQ20 393 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 FAM72DQ6L9T8 149 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 C6orf89Q6UWU4 347 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 SLC39A5Q6ZMH5 540 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 TIFABQ6ZNK6 161 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 CAPN12Q6ZSI9 719 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 ZNF534Q76KX8 674 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 SRLQ86TD4 932 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 FAM72BQ86X60 149 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 IGDCC3Q8IVU1 814 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 KLHDC8BQ8IXV7 354 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 TAB3Q8N5C8 712 aaPredicted RBP10.66□□□□□ -0.7
VPS25-203ENST00000589520 ANKRD42Q8N9B4 389 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 PDZD8Q8NEN9 1154 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 SLC39A13Q96H72 371 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 DEFB118Q96PH6 123 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 WDR83Q9BRX9 315 aaKnown RBP10.66□□□□□ -0.7
VPS25-203ENST00000589520 RNF208Q9H0X6 261 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 GBA3Q9H227 469 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 VPS11Q9H270 941 aa10.66□□□□□ -0.7
VPS25-203ENST00000589520 HIPK3Q9H422 1215 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms