RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 UNC80Q8N2C7 3258 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 A0A0C4DFX4 3053 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 ZSCAN5CA6NGD5 496 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 ACSL4O60488 711 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 SERPINB6P35237 376 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 CCR2P41597 374 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 VSNL1P62760 191 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 XRCC4Q13426 336 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 GRASPQ7Z6J2 395 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 CHSY1Q86X52 802 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 DENND1CQ8IV53 801 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 ALLCQ8N6M5 410 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 ZNF707Q96C28 371 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 DZANK1Q9NVP4 752 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 CPQQ9Y646 472 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 ZNF197O14709 1029 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 MFSD11O43934 449 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 MAP3K6O95382 1288 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 SLC7A9P82251 487 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 SLC10A2Q12908 348 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 GPR158Q5T848 1215 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 CDKL3Q8IVW4 592 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 SMG7Q92540 1137 aaKnown RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 PRMT1Q99873 361 aaKnown RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 TRIM31Q9BZY9 425 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 NSUN3Q9H649 340 aaKnown RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 SFXN1Q9H9B4 322 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 GDF3Q9NR23 364 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 ARGLU1Q9NWB6 273 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 PPARGC1AQ9UBK2 798 aaKnown RBP22.93■■□□□ 1.26
ATG4D-209ENST00000588857 NEU3Q9UQ49 428 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 RAD54BQ9Y620 910 aa22.93■■□□□ 1.26
ATG4D-209ENST00000588857 SPTBN5Q9NRC6 3674 aaKnown RBP22.92■■□□□ 1.26
ATG4D-209ENST00000588857 ESYT3A0FGR9 886 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 F5H5T6 163 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 TACR2P21452 398 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 PTK6Q13882 451 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 PDK1Q15118 436 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 SKIV2LQ15477 1246 aaKnown RBP22.92■■□□□ 1.26
ATG4D-209ENST00000588857 KCTD19Q17RG1 926 aaPredicted RBP22.92■■□□□ 1.26
ATG4D-209ENST00000588857 STXBP5Q5T5C0 1151 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 NADSYN1Q6IA69 706 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 FBXL22Q6P050 247 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 IFT81Q8WYA0 676 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 TCEAL4Q96EI5 215 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 ZFRQ96KR1 1074 aaKnown RBP22.92■■□□□ 1.26
ATG4D-209ENST00000588857 DDX50Q9BQ39 737 aaKnown RBP22.92■■□□□ 1.26
ATG4D-209ENST00000588857 SLC46A2Q9BY10 475 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 ZYG11BQ9C0D3 744 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 DONSONQ9NYP3 566 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 ASIC3Q9UHC3 531 aa22.92■■□□□ 1.26
ATG4D-209ENST00000588857 GOLGA6L7A0A1B0GV03 622 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 SOBPA7XYQ1 873 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 KRT14P02533 472 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 KLKB1P03952 638 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 STIP1P31948 543 aaKnown RBP22.91■■□□□ 1.26
ATG4D-209ENST00000588857 KCNC3Q14003 757 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 BRD3Q15059 726 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 TEAD2Q15562 447 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 DUPD1Q68J44 220 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 ZNF683Q8IZ20 524 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 C12orf76Q8N812 135 aaPredicted RBP22.91■■□□□ 1.26
ATG4D-209ENST00000588857 CCDC89Q8N998 374 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 CCHCR1Q8TD31 782 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 CASKIN2Q8WXE0 1202 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 RPRD1AQ96P16 312 aaPredicted RBP22.91■■□□□ 1.26
ATG4D-209ENST00000588857 DPH5Q9H2P9 285 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 C10orf88Q9H8K7 445 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 FAM114A2Q9NRY5 505 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 MPP6Q9NZW5 540 aa22.91■■□□□ 1.26
ATG4D-209ENST00000588857 LSM7Q9UK45 103 aaKnown RBP22.91■■□□□ 1.26
ATG4D-209ENST00000588857 AGO1Q9UL18 857 aaKnown RBP22.91■■□□□ 1.26
ATG4D-209ENST00000588857 IGLV3-10A0A075B6K4 115 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 CFAP69A5D8W1 941 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 HACD1B0YJ81 288 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 NRG2O14511 850 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-209ENST00000588857 PPP1R12AO14974 1030 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-209ENST00000588857 NCAM2O15394 837 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 IFNB1P01574 187 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 RHOQP17081 205 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 AVPR1AP37288 418 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 NTHL1P78549 312 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 CUL1Q13616 776 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 TRIP13Q15645 432 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-209ENST00000588857 SLC5A9Q2M3M2 681 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 SLC45A4Q5BKX6 768 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 TMC5Q6UXY8 1006 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 CCNI2Q6ZMN8 369 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-209ENST00000588857 LGI2Q8N0V4 545 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 LZTR1Q8N653 840 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 RTL3Q8N8U3 475 aaKnown RBP22.9■■□□□ 1.26
ATG4D-209ENST00000588857 VN1R2Q8NFZ6 395 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 TFB1MQ8WVM0 346 aaKnown RBP22.9■■□□□ 1.26
ATG4D-209ENST00000588857 SEC14L1Q92503 715 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 OLFM3Q96PB7 478 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 TASP1Q9H6P5 420 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 THEGQ9P2T0 379 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 C2orf16Q68DN1 1984 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 SHROOM3Q8TF72 1996 aa22.9■■□□□ 1.26
ATG4D-209ENST00000588857 BCLAF3A2AJT9 711 aaKnown RBP22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms