RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 DDX42Q86XP3 938 aaKnown RBP eCLIP31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 RSAD2Q8WXG1 361 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 SLC22A12Q96S37 553 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 ZNF576Q9H609 170 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 TASP1Q9H6P5 420 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 STOML2Q9UJZ1 356 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 ZNF510Q9Y2H8 683 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 NEU2Q9Y3R4 380 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 TMEM265A0A087WTH1 108 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 DRGXA6NNA5 263 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 F5H5T6 163 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 PPP1R12AO14974 1030 aaPredicted RBP31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 MFSD11O43934 449 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 RHOQP17081 205 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 MX2P20592 715 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 TACR2P21452 398 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 CORO1AP31146 461 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 SLC10A2Q12908 348 aaPredicted RBP31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 PRSS36Q5K4E3 855 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 RAP1GAP2Q684P5 730 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 DARS2Q6PI48 645 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 ZC3H18Q86VM9 953 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 CYP2S1Q96SQ9 504 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 TRIM51Q9BSJ1 452 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 TMEM121Q9BTD3 319 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 FAM129AQ9BZQ8 928 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 PIDD1Q9HB75 910 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 GKN1Q9NS71 199 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 LSM7Q9UK45 103 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 VANGL2Q9ULK5 521 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 CPQQ9Y646 472 aa31.96■■■□□ 2.71
CAPNS1-206ENST00000588815 SGK1O00141 431 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 CCR2P41597 374 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 VSNL1P62760 191 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 SLC45A4Q5BKX6 768 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 FBXL22Q6P050 247 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 C14orf80Q86SX3 495 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 RTL3Q8N8U3 475 aaKnown RBP31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 SMG7Q92540 1137 aaKnown RBP31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 FERMT1Q9BQL6 677 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 PCDH9Q9HC56 1237 aa31.95■■■□□ 2.7
CAPNS1-206ENST00000588815 ERLIN1O75477 346 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 ADGRF1Q5T601 910 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 GPR158Q5T848 1215 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 NADSYN1Q6IA69 706 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 DENND1CQ8IV53 801 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 ANKRD7Q92527 254 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 QKIQ96PU8 341 aaKnown RBP eCLIP31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 SLC46A2Q9BY10 475 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 TMEM248Q9NWD8 314 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 ARHGAP26Q9UNA1 814 aa31.94■■■□□ 2.7
CAPNS1-206ENST00000588815 RFXAPO00287 272 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 NDC80O14777 642 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 MOSPD3O75425 235 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 KRT14P02533 472 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 KLKB1P03952 638 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 ZNF33AQ06730 810 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 MAP9Q49MG5 647 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 ZNF697Q5TEC3 545 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 CCNI2Q6ZMN8 369 aaPredicted RBP31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 GRASPQ7Z6J2 395 aaPredicted RBP31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 EFHBQ8N7U6 833 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 TFB1MQ8WVM0 346 aaKnown RBP31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 RTP4Q96DX8 246 aa31.93■■■□□ 2.7
CAPNS1-206ENST00000588815 H2AFXP16104 143 aaPredicted RBP31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 AVPR1AP37288 418 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 FAM133BQ5BKY9 247 aaKnown RBP31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 RABGAP1LQ5R372 815 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 NLRP14Q86W24 1093 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 LRRC49Q8IUZ0 686 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 CMTM8Q8IZV2 173 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 RPRD1AQ96P16 312 aaPredicted RBP31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 SMPD4Q9NXE4 827 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 AGO1Q9UL18 857 aaKnown RBP31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 MFHAS1Q9Y4C4 1052 aa31.92■■■□□ 2.7
CAPNS1-206ENST00000588815 ZSCAN5CA6NGD5 496 aaPredicted RBP31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 GJA1P17302 382 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 TEAD2Q15562 447 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 Q6ZNB5 142 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 HTR3DQ70Z44 454 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 BBOF1Q8ND07 529 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 VN1R2Q8NFZ6 395 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 ADAMTS19Q8TE59 1207 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 HNRNPLLQ8WVV9 542 aaKnown RBP31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 CASKIN2Q8WXE0 1202 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 TCEAL4Q96EI5 215 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 ASIC3Q9UHC3 531 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 NYNRINQ9P2P1 1898 aaKnown RBP31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 IRF1P10914 325 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 GALNT2Q10471 571 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 SLC5A9Q2M3M2 681 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 TTC39BQ5VTQ0 682 aaPredicted RBP31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 C4orf22Q6V702 233 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 NPWQ8N729 165 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 HDAC11Q96DB2 347 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 KLC2Q9H0B6 622 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 WHRNQ9P202 907 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 SH3BP1Q9Y3L3 701 aa31.91■■■□□ 2.7
CAPNS1-206ENST00000588815 MYO18AQ92614 2054 aaKnown RBP31.9■■■□□ 2.7
CAPNS1-206ENST00000588815 ACTN2P35609 894 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms