RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ITIH6Q6UXX5 1313 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 A0A1B0GTQ1 180 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 FAM149AA5PLN7 773 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 TRIM49BA6NDI0 452 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 PIK3R2O00459 728 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 VILLO15195 856 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 LTFP02788 710 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 WNT1P04628 370 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 POLR2EP19388 210 aaKnown RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 TBXAS1P24557 533 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 CSKP41240 450 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 RPS24P62847 133 aaKnown RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 RACK1P63244 317 aaKnown RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 FKBP3Q00688 224 aaKnown RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 IL9RQ01113 521 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 LRMPQ12912 555 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 KCNJ12Q14500 433 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 SUZ12Q15022 739 aaKnown RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 SHBQ15464 509 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 FSCBQ5H9T9 825 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 TMEM270Q6UE05 265 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 UNC45BQ8IWX7 931 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 GALNT15Q8N3T1 639 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 HJURPQ8NCD3 748 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 SPATA20Q8TB22 786 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 DQX1Q8TE96 717 aaKnown RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 SLC39A13Q96H72 371 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 SCAND2PQ9GZW5 306 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-204ENST00000588687 ADAMTS1Q9UHI8 967 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 SCML1Q9UN30 329 aa19.12■□□□□ 0.65
CCDC43-204ENST00000588687 CFAP46Q8IYW2 2715 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 A0A1W2PPC4 97 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 TRABD2BA6NFA1 517 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 GOLGA8CPA6NN73 597 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 CALCAP01258 141 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 RPL34P49207 117 aaKnown RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 SLC11A2P49281 568 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 GALCP54803 685 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 TBX4P57082 545 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 CST6Q15828 149 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 C9orf64Q5T6V5 341 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 ZNF658Q5TYW1 1059 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 MMS22LQ6ZRQ5 1243 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 FMR1NBQ8N0W7 255 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 ZNF557Q8N988 423 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 KDM1BQ8NB78 822 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 LMO3Q8TAP4 145 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 HNRNPLLQ8WVV9 542 aaKnown RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 GDPD2Q9HCC8 539 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 ARMCX3Q9UH62 379 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-204ENST00000588687 SUN2Q9UH99 717 aa19.11■□□□□ 0.65
CCDC43-204ENST00000588687 A0A087WV48 116 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 M0QYV0 167 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 WNT9AO14904 365 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 PMM2O15305 246 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 MID1O15344 667 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 ASLP04424 464 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 BRD2P25440 801 aaKnown RBP19.1■□□□□ 0.65
CCDC43-204ENST00000588687 CTSOP43234 321 aaPredicted RBP19.1■□□□□ 0.65
CCDC43-204ENST00000588687 FMO5P49326 533 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 LRRC63Q05C16 580 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 CYP4F3Q08477 520 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 NNTQ13423 1086 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 CNGA2Q16280 664 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 MS4A13Q5J8X5 152 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 PITRM1Q5JRX3 1037 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 NCEH1Q6PIU2 408 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 DHRS13Q6UX07 377 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 DHX40Q8IX18 779 aaKnown RBP19.1■□□□□ 0.65
CCDC43-204ENST00000588687 HSFY1Q96LI6 401 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 FBXL12Q9NXK8 326 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 STIM2Q9P246 746 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 XPO7Q9UIA9 1087 aaKnown RBP19.1■□□□□ 0.65
CCDC43-204ENST00000588687 FZD4Q9ULV1 537 aa19.1■□□□□ 0.65
CCDC43-204ENST00000588687 KNTC1P50748 2209 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 ARID1BQ8NFD5 2236 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-204ENST00000588687 A0A1W2PP55 124 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 A0A1W2PR77 199 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 AADATQ8N5Z0 425 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 FAM131CQ96AQ9 280 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 CRELD1Q96HD1 420 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 GSDMAQ96QA5 445 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 ELF4Q99607 663 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-204ENST00000588687 ACE2Q9BYF1 805 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-204ENST00000588687 NEUROG2Q9H2A3 272 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 RMND1Q9NWS8 449 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 TLR6Q9Y2C9 796 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 ATMQ13315 3056 aa19.09■□□□□ 0.65
CCDC43-204ENST00000588687 SETXQ7Z333 2677 aaKnown RBP19.08■□□□□ 0.65
CCDC43-204ENST00000588687 TTC34A8MYJ7 566 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 CBX4O00257 560 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 DFNA5O60443 496 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 FBXO21O94952 628 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 DCAF6Q58WW2 860 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 ADAT2Q7Z6V5 191 aaKnown RBP19.08■□□□□ 0.64
CCDC43-204ENST00000588687 TAC4Q86UU9 113 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 GATAD2AQ86YP4 633 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 SCUBE3Q8IX30 993 aa19.08■□□□□ 0.64
CCDC43-204ENST00000588687 ENGASEQ8NFI3 743 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms