RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 UBE2Q2Q8WVN8 375 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 CENPIQ92674 756 aaPredicted RBP20.83■□□□□ 0.93
ATG4D-208ENST00000588667 TMA16Q96EY4 203 aaKnown RBP20.83■□□□□ 0.93
ATG4D-208ENST00000588667 PNKPQ96T60 521 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 CNPY3Q9BT09 278 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 TKTL2Q9H0I9 626 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 DEC1Q9P2X7 70 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 SNX12Q9UMY4 172 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 CACNA1IQ9P0X4 2223 aa20.83■□□□□ 0.93
ATG4D-208ENST00000588667 TSPAN3O60637 253 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 DESP17661 470 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 TCP1P17987 556 aaKnown RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 ATXN1P54253 815 aaKnown RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 MS4A13Q5J8X5 152 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 MPP7Q5T2T1 576 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 PEX26Q7Z412 305 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 CHSY1Q86X52 802 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 PHTF2Q8N3S3 785 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 FAM172AQ8WUF8 416 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 LMAN1LQ9HAT1 526 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 ARHGEF4Q9NR80 690 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 DNAJC17Q9NVM6 304 aaKnown RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 HYOU1Q9Y4L1 999 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 TYW5A2RUC4 315 aaKnown RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 PAGE1O75459 146 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 EGFP01133 1207 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 TACR2P21452 398 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 HOXD9P28356 352 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 WHAMMP3Q1A5X7 153 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 FBXO43Q4G163 708 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 RAP1GAP2Q684P5 730 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 FAM131BQ86XD5 332 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 SYNPOQ8N3V7 929 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 HJURPQ8NCD3 748 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 MYRIPQ8NFW9 859 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 FNIP1Q8TF40 1166 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 PRICKLE1Q96MT3 831 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 TLR10Q9BXR5 811 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 RBM12Q9NTZ6 932 aaKnown RBP20.82■□□□□ 0.92
ATG4D-208ENST00000588667 FBXO10Q9UK96 956 aa20.82■□□□□ 0.92
ATG4D-208ENST00000588667 TMEM191CA6NGB0 347 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 F5H5T6 163 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 KAT7O95251 611 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 SLU7O95391 586 aaKnown RBP20.81■□□□□ 0.92
ATG4D-208ENST00000588667 APODP05090 189 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 GRIA2P42262 883 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 SGSHP51688 502 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 HDAC4P56524 1084 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 KDSRQ06136 332 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 RPS6KA1Q15418 735 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 ACBD5Q5T8D3 534 aaPredicted RBP20.81■□□□□ 0.92
ATG4D-208ENST00000588667 SH3PXD2AQ5TCZ1 1133 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 RNF43Q68DV7 783 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 GRAMD4Q6IC98 578 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 PRMT1Q99873 361 aaKnown RBP20.81■□□□□ 0.92
ATG4D-208ENST00000588667 IER2Q9BTL4 223 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 SLC2A11Q9BYW1 496 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 CHRDQ9H2X0 955 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 ANLNQ9NQW6 1124 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 AMFRQ9UKV5 643 aa20.81■□□□□ 0.92
ATG4D-208ENST00000588667 DGKGP49619 791 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 NUBP1P53384 320 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 OGDHQ02218 1023 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 MESP2Q0VG99 397 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 LGI2Q8N0V4 545 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 TERB1Q8NA31 727 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 EZH1Q92800 747 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-208ENST00000588667 HS3ST4Q9Y661 456 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 CACNA1HO95180 2353 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 DOCK4Q8N1I0 1966 aa20.8■□□□□ 0.92
ATG4D-208ENST00000588667 A0A0A0MRY4 1105 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 I6L893 689 aaPredicted RBP20.79■□□□□ 0.92
ATG4D-208ENST00000588667 TBL1XO60907 577 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 PSMA2P25787 234 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 RAB6CQ53S08 254 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 NUDT18Q6ZVK8 323 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 NT5DC3Q86UY8 548 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 MNS1Q8NEH6 495 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 CCDC26Q8TAB7 109 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 MYEOVQ96EZ4 313 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 HAPLN3Q96S86 360 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 RAB6CQ9H0N0 254 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 GOLPH3Q9H4A6 298 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 LCMT1Q9UIC8 334 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 ANAPC7Q9UJX3 599 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 SLC27A6Q9Y2P4 619 aa20.79■□□□□ 0.92
ATG4D-208ENST00000588667 CISD3P0C7P0 127 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 RPS24P62847 133 aaKnown RBP20.78■□□□□ 0.92
ATG4D-208ENST00000588667 AUHQ13825 339 aaKnown RBP20.78■□□□□ 0.92
ATG4D-208ENST00000588667 MESDQ14696 234 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 ARL13BQ3SXY8 428 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 RABGAP1LQ5R372 815 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 TTC39BQ5VTQ0 682 aaPredicted RBP20.78■□□□□ 0.92
ATG4D-208ENST00000588667 CEP112Q8N8E3 955 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 ZNF557Q8N988 423 aaPredicted RBP20.78■□□□□ 0.92
ATG4D-208ENST00000588667 DTWD2Q8NBA8 298 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 OSBPL9Q96SU4 736 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 TRIM7Q9C029 511 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 MUC6Q6W4X9 2439 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 TBC1D3BA6NDS4 549 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms