RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FNTAP49354 379 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 EIF3EP60228 445 aaKnown RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 MTA1Q13330 715 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 CBX2Q14781 532 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 OASLQ15646 514 aaKnown RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 ALFQ53S48 1182 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 C8orf74Q6P047 294 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 RFWD3Q6PCD5 774 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 TMCO3Q6UWJ1 677 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 CIR1Q86X95 450 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 LGI2Q8N0V4 545 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 SH3RF2Q8TEC5 729 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 LRRN4Q8WUT4 740 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 UBXN4Q92575 508 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 P3H4Q92791 437 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 PRICKLE1Q96MT3 831 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 RPRD1AQ96P16 312 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 RHOXF2Q9BQY4 288 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 KLC2Q9H0B6 622 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 S1PR5Q9H228 398 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 NDFIP2Q9NV92 336 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 CLDND1Q9NY35 253 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 DTLQ9NZJ0 730 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 STIM2Q9P246 746 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 PPARGC1AQ9UBK2 798 aaKnown RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 PCYOX1Q9UHG3 505 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 STOML2Q9UJZ1 356 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 SH3BP1Q9Y3L3 701 aa11.65□□□□□ -0.54
VMP1-207ENST00000588131 NUP210Q8TEM1 1887 aaPredicted RBP11.65□□□□□ -0.54
VMP1-207ENST00000588131 WASH4PA8MWX3 477 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 F5H5T6 163 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 MCF2LO15068 1137 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 FGF10O15520 208 aaPredicted RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 TSPAN3O60637 253 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 LATS1O95835 1130 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 RHOQP17081 205 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 LTBRP36941 435 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 SGSHP51688 502 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 VCPP55072 806 aaKnown RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 BYSLQ13895 437 aaKnown RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 ELF2Q15723 593 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 C5orf22Q49AR2 442 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 ADGRF1Q5T601 910 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 ACBD5Q5T8D3 534 aaPredicted RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 DRICH1Q6PGQ1 229 aaPredicted RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 LRRC31Q6UY01 552 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 HTR3DQ70Z44 454 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 GET4Q7L5D6 327 aaPredicted RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 ZC3H18Q86VM9 953 aaKnown RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 JAMLQ86YT9 394 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 NPAS3Q8IXF0 933 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 CCDC105Q8IYK2 499 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 CFAP52Q8N1V2 620 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 MICALL1Q8N3F8 863 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 RTL3Q8N8U3 475 aaKnown RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 CCDC114Q96M63 670 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 OLFM3Q96PB7 478 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 HINFPQ9BQA5 517 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 TRIM51Q9BSJ1 452 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 FRMD8P1Q9BZ68 369 aaPredicted RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 ZYG11BQ9C0D3 744 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 ADAM7Q9H2U9 754 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 CATSPERBQ9H7T0 1116 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 ANKZF1Q9H8Y5 726 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 PRDM16Q9HAZ2 1276 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 HOMER3Q9NSC5 361 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 LSM7Q9UK45 103 aaKnown RBP11.64□□□□□ -0.55
VMP1-207ENST00000588131 CDH23Q9H251 3354 aa11.64□□□□□ -0.55
VMP1-207ENST00000588131 UQCRHLA0A096LP55 91 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZSCAN5CA6NGD5 496 aaPredicted RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 H7C0C1 242 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 GFRA2O00451 464 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 UQCRHP07919 91 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 RBP3P10745 1247 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ATP5OP48047 213 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 NR2C2P49116 596 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 RPS24P62847 133 aaKnown RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 DR1Q01658 176 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 USP4Q13107 963 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 DHX34Q14147 1143 aaKnown RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 COL19A1Q14993 1142 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZNF77Q15935 545 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 FAM182AQ5T1J6 154 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 EP400NLQ6ZTU2 488 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 TFAP2DQ7Z6R9 452 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 PRUNE1Q86TP1 453 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ARID3BQ8IVW6 561 aaPredicted RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 ARHGAP12Q8IWW6 846 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 FAM217AQ8IXS0 508 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms