RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 BBS12Q6ZW61 710 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-202ENST00000585333 SLC13A5Q86YT5 568 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-202ENST00000585333 CEP112Q8N8E3 955 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 RTL3Q8N8U3 475 aaKnown RBP13.33□□□□□ -0.28
TRIM47-202ENST00000585333 TTC16Q8NEE8 873 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 ADAMTS19Q8TE59 1207 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 RAPGEF5Q92565 580 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 P3H4Q92791 437 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
TRIM47-202ENST00000585333 MYADMQ96S97 322 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
TRIM47-202ENST00000585333 SLC2A11Q9BYW1 496 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 TMEM248Q9NWD8 314 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 GPATCH2LQ9NWQ4 482 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.28
TRIM47-202ENST00000585333 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 THEGQ9P2T0 379 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 VANGL2Q9ULK5 521 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 NOTCH4Q99466 2003 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 DENND4AQ7Z401 1863 aa13.33□□□□□ -0.28
TRIM47-202ENST00000585333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-202ENST00000585333 GRXCR2A6NFK2 248 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 CCDC188H7C350 402 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 PPP1R12AO14974 1030 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-202ENST00000585333 FGGP02679 453 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 GOT1P17174 413 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 MARCKSL1P49006 195 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 NDST2P52849 883 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 YBEYP58557 167 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-202ENST00000585333 GAD2Q05329 585 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 ZNF33AQ06730 810 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 ZNF177Q13360 481 aaPredicted RBP13.32□□□□□ -0.28
TRIM47-202ENST00000585333 DPYSQ14117 519 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 PARP15Q460N3 678 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 ATP13A4Q4VNC1 1196 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 FAM133BQ5BKY9 247 aaKnown RBP13.32□□□□□ -0.28
TRIM47-202ENST00000585333 SLC9A4Q6AI14 798 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 TXNRD3NBQ6F5E7 133 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 BBS7Q8IWZ6 715 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 DDI1Q8WTU0 396 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 IRF7Q92985 503 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 MSANTD3Q96H12 275 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 PSMB7Q99436 277 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 ARHGEF4Q9NR80 690 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 SPHK2Q9NRA0 654 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 CCL26Q9Y258 94 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 EYSQ5T1H1 3165 aa13.32□□□□□ -0.28
TRIM47-202ENST00000585333 CXorf51AA0A1B0GTR3 108 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 C3orf70A6NLC5 250 aaPredicted RBP13.31□□□□□ -0.28
TRIM47-202ENST00000585333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.31□□□□□ -0.28
TRIM47-202ENST00000585333 ANHXE9PGG2 379 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 DLL1O00548 723 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 MCF2LO15068 1137 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 MTSS1O43312 755 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 GREM1O60565 184 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 CST8O60676 142 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 ERCC2P18074 760 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 OR1E1P30953 314 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 CXCR5P32302 372 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 PFKPQ01813 784 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 CDH18Q13634 790 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 PAFAH1B3Q15102 231 aaKnown RBP13.31□□□□□ -0.28
TRIM47-202ENST00000585333 PDK1Q15118 436 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 CA9Q16790 459 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 RAB6CQ53S08 254 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 KAZNQ674X7 775 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 NADSYN1Q6IA69 706 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 CCDC70Q6NSX1 233 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 CPNE8Q86YQ8 564 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 RAB6CQ9H0N0 254 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
TRIM47-202ENST00000585333 TRPV5Q9NQA5 729 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 KLHL11Q9NVR0 708 aa13.31□□□□□ -0.28
TRIM47-202ENST00000585333 ILVBLA1L0T0 632 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 CFAP69A5D8W1 941 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 ZSCAN5CA6NGD5 496 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 ARHGAP42A6NI28 874 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 HACD1B0YJ81 288 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 H0Y626 953 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 HOXC11O43248 304 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 RAMP2O60895 175 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 LUC7L3O95232 432 aaKnown RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 FCARP24071 287 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 EIF2DP41214 584 aaKnown RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 VIPR2P41587 438 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 GEMIN4P57678 1058 aaKnown RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 XRCC4Q13426 336 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 HTR4Q13639 388 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 DMC1Q14565 340 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 DCAF12L1Q5VU92 463 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 TANGO2Q6ICL3 276 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 TIGD7Q6NT04 549 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms