RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 ERICH1Q86X53 443 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 MMAAQ8IVH4 418 aaKnown RBP12.79□□□□□ -0.36
TOP3A-215ENST00000583328 OXR1Q8N573 874 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 WFDC5Q8TCV5 224 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 EDEM1Q92611 657 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 MMRN2Q9H8L6 949 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 LRRC4Q9HBW1 653 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 EXOC1Q9NV70 894 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 STIM2Q9P246 746 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 ADAMTS1Q9UHI8 967 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 PCDHA7Q9UN72 937 aa12.79□□□□□ -0.36
TOP3A-215ENST00000583328 CYSRT1A8MQ03 144 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 PDXKO00764 312 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 CALUO43852 315 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-215ENST00000583328 MT-CO3P00414 261 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 TRIM49P0CI25 452 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 TRIM49CP0CI26 452 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 SLC8A1P32418 973 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 NXPH1P58417 271 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 E2F1Q01094 437 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 INSM1Q01101 510 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-215ENST00000583328 RHDQ02161 417 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 KCNJ12Q14500 433 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 HNRNPA1L2Q32P51 320 aaKnown RBP12.78□□□□□ -0.36
TOP3A-215ENST00000583328 MPP7Q5T2T1 576 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 BSPRYQ5W0U4 402 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 ARHGAP17Q68EM7 881 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 RFWD3Q6PCD5 774 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 ZNF557Q8N988 423 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-215ENST00000583328 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 ZNF248Q8NDW4 579 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 OR14C36Q8NHC7 312 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 TMEM174Q8WUU8 243 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 RFFLQ8WZ73 363 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 KCTD10Q9H3F6 313 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 TPX2Q9ULW0 747 aaKnown RBP12.78□□□□□ -0.36
TOP3A-215ENST00000583328 TMEM131Q92545 1883 aa12.78□□□□□ -0.36
TOP3A-215ENST00000583328 TBC1D3DA0A087WVF3 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3IA0A087WXS9 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3EA0A087X179 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3KA0A087X1G2 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3FA6NER0 549 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3LB9A6J9 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 MSI1O43347 362 aaKnown RBP12.77□□□□□ -0.37
TOP3A-215ENST00000583328 ASLP04424 464 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3HP0C7X1 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 KRT13P13646 458 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 SLC11A2P49281 568 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 C9orf64Q5T6V5 341 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 ARHGAP40Q5TG30 622 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 PIK3R6Q5UE93 754 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3GQ6DHY5 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3CQ6IPX1 549 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.37
TOP3A-215ENST00000583328 BHLHA9Q7RTU4 235 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 CCDC117Q8IWD4 279 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-215ENST00000583328 GRAMD1CQ8IYS0 662 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TBC1D3Q8IZP1 549 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TTC39CQ8N584 583 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 DCBLD1Q8N8Z6 715 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 SLC4A11Q8NBS3 891 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 KIAA0895Q8NCT3 520 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TTC17Q96AE7 1141 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 WBP1Q96G27 269 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 MYO19Q96H55 970 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 FZD4Q9ULV1 537 aa12.77□□□□□ -0.37
TOP3A-215ENST00000583328 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 TULP2O00295 520 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 IRAK2O43187 625 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 KLRC4O43908 158 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 MAGEC1O60732 1142 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 GOT1P17174 413 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 ACP1P24666 158 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 CSKP41240 450 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 PSMD8P48556 350 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 RAD23BP54727 409 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 UCNP55089 124 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 PCBP4P57723 403 aaKnown RBP12.76□□□□□ -0.37
TOP3A-215ENST00000583328 TMPRSS3P57727 454 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 DAB2P98082 770 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 SFMBT2Q5VUG0 894 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 RESP18Q5W5W9 173 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 INTS8Q75QN2 995 aaKnown RBP12.76□□□□□ -0.37
TOP3A-215ENST00000583328 PRPF39Q86UA1 669 aaKnown RBP12.76□□□□□ -0.37
TOP3A-215ENST00000583328 SPATS2Q86XZ4 545 aaKnown RBP12.76□□□□□ -0.37
TOP3A-215ENST00000583328 UNC45BQ8IWX7 931 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 MFSD2AQ8NA29 543 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 FIBINQ8TAL6 211 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 ZNF578Q96N58 590 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-215ENST00000583328 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms