RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MRPL58Q14197 206 aaKnown RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 COL19A1Q14993 1142 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 VEPH1Q14D04 833 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 TERF2Q15554 542 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 UAP1Q16222 522 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 DUSP6Q16828 381 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 BBS9Q3SYG4 887 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 C10orf120Q5SQS8 335 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 RNASEH2BQ5TBB1 312 aaKnown RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 RHBDF2Q6PJF5 856 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 TAC4Q86UU9 113 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ZBED8Q8IZ13 594 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ATP6V0D2Q8N8Y2 350 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ATAD1Q8NBU5 361 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 DQX1Q8TE96 717 aaKnown RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 HTR3CQ8WXA8 447 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 CASP10Q92851 521 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ARL8AQ96BM9 186 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 SERPINB12Q96P63 405 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 HAPLN3Q96S86 360 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 EMILIN2Q9BXX0 1053 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 CAPS2Q9BXY5 557 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 TXLNGYQ9BZA5 131 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 OSBPL2Q9H1P3 480 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ARHGEF4Q9NR80 690 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 DPP7Q9UHL4 492 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 MAGED2Q9UNF1 606 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 NOVA2Q9UNW9 492 aaKnown RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 SLC27A5Q9Y2P5 690 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 IKBKGQ9Y6K9 419 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 MTCL1Q9Y4B5 1905 aaKnown RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 C2CD2LO14523 706 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 FGF10O15520 208 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 GCATO75600 419 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 MAP3K6O95382 1288 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 AGTP01019 485 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 URODP06132 367 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 FYNP06241 537 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 CTSAP10619 480 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 HAPLN1P10915 354 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 HOXB8P17481 243 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 ERCC2P18074 760 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 OR1D2P34982 312 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 CHKAP35790 457 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PBX3P40426 434 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 GDF10P55107 478 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 TBX4P57082 545 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PITX1P78337 314 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 GBE1Q04446 702 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 EFEMP1Q12805 493 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 DUSP4Q13115 394 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PRPSAP1Q14558 356 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PAFAH1B3Q15102 231 aaKnown RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 ACBD5Q5T8D3 534 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 SDHAF4Q5VUM1 108 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 NCBP2-AS2Q69YL0 99 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 ITPRIPL1Q6GPH6 555 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PRSS55Q6UWB4 352 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 B4GALNT4Q76KP1 1039 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 ADGRD2Q7Z7M1 963 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 LZTR1Q8N653 840 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 MRPL43Q8N983 215 aaKnown RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 ATP11CQ8NB49 1132 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 STKLD1Q8NE28 680 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PRCCQ92733 491 aaPredicted RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 TBC1D31Q96DN5 1066 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 SPATA17Q96L03 361 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 B3GALT6Q96L58 329 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 C9orf72Q96LT7 481 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 QKIQ96PU8 341 aaKnown RBP eCLIP9.56□□□□□ -0.881e-9■■■■■ 35.3
SS18-220ENST00000582092 TMEM109Q9BVC6 243 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PHACTR1Q9C0D0 580 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 ADAM7Q9H2U9 754 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 SMOC2Q9H3U7 446 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 CNOT10Q9H9A5 744 aaKnown RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 PPCSQ9HAB8 311 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 MRPL17Q9NRX2 175 aaKnown RBP9.56□□□□□ -0.88
SS18-220ENST00000582092 MARCH5Q9NX47 278 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PSD3Q9NYI0 1048 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 NINJ2Q9NZG7 142 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 SFMBT1Q9UHJ3 866 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 IRAK3Q9Y616 596 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 CDY1Q9Y6F8 540 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
SS18-220ENST00000582092 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 EXOC1LA0A1B0GW35 172 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 MTMR11A4FU01 709 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 C5orf60A6NFR6 353 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 SLC38A8A6NNN8 435 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 TNFRSF10BO14763 440 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 PER2O15055 1255 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 ALOX15BO15296 676 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 IRAK2O43187 625 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 PSMD3O43242 534 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 MBTPS2O43462 519 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 OPHN1O60890 802 aa9.55□□□□□ -0.88
SS18-220ENST00000582092 MOCS2O96007 188 aaPredicted RBP9.55□□□□□ -0.88
SS18-220ENST00000582092 APRTP07741 180 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms