RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 TOP1MTQ969P6 601 aa20.32■□□□□ 0.84
KRT16P3-203ENST00000580621 HDAC11Q96DB2 347 aa20.32■□□□□ 0.84
KRT16P3-203ENST00000580621 SLC39A13Q96H72 371 aa20.32■□□□□ 0.84
KRT16P3-203ENST00000580621 FETUBQ9UGM5 382 aa20.32■□□□□ 0.84
KRT16P3-203ENST00000580621 BACE2Q9Y5Z0 518 aa20.32■□□□□ 0.84
KRT16P3-203ENST00000580621 ABHD14A-ACY1A0A1B0GW23 586 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 WDR27A2RRH5 827 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 SRRM3A6NNA2 597 aaPredicted RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 FOXO6A8MYZ6 492 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 MOCS2O96007 188 aaPredicted RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 CHN1P15882 459 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 GARSP41250 739 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 MAGEA3P43357 314 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 PSEN1P49768 467 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 RASA2Q15283 850 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 PARP6Q2NL67 630 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 CENPTQ96BT3 561 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 TBC1D31Q96DN5 1066 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 PAWRQ96IZ0 340 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 XAB2Q9HCS7 855 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 EIF2B3Q9NR50 452 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 TLR8Q9NR97 1041 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 F5H423 210 aaPredicted RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 KCNK1O00180 336 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 FGF10O15520 208 aaPredicted RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 SPAG6O75602 509 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 SLC2A3P11169 496 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 RPL17P18621 184 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 PTPN3P26045 913 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 TBX4P57082 545 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 GEMIN4P57678 1058 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 CDK16Q00536 496 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 EFEMP1Q12805 493 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 KLHL38Q2WGJ6 581 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 SPOUT1Q5T280 376 aaKnown RBP20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 ARTNQ5T4W7 220 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 LRRC39Q96DD0 335 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 EPN3Q9H201 632 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 IGSF9Q9P2J2 1179 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 HS3ST4Q9Y661 456 aa20.31■□□□□ 0.84
KRT16P3-203ENST00000580621 SLC38A8A6NNN8 435 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 MTSS1O43312 755 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 PSMB4P28070 264 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 NRG1Q02297 640 aaPredicted RBP20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 NR1H3Q13133 447 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 EFTUD2Q15029 972 aaKnown RBP eCLIP20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 RASIP1Q5U651 963 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 GIPC2Q8TF65 315 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 DEPDC1BQ8WUY9 529 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 ZNF689Q96CS4 500 aaPredicted RBP20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 CELF6Q96J87 481 aaKnown RBP20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 CATSPERBQ9H7T0 1116 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 OLA1Q9NTK5 396 aaKnown RBP20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 KLHL8Q9P2G9 620 aaPredicted RBP20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 RSPH14Q9UHP6 348 aa20.3■□□□□ 0.84
KRT16P3-203ENST00000580621 KIAA0100Q14667 2235 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 TIMP1P01033 207 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 CREB1P16220 341 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 ATF6P18850 670 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 OR1D2P34982 312 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 SARNPP82979 210 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 COG7P83436 770 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 KIAA1841Q6NSI8 718 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 PID1Q7Z2X4 250 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 TMCO2Q7Z6W1 182 aaPredicted RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 CFAP36Q96G28 342 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 XPO6Q96QU8 1125 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 RABEP2Q9H5N1 569 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 PSMC3IPQ9P2W1 217 aaPredicted RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 ACTL7BQ9Y614 415 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 E9PAM4 449 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 ITGB8P26012 769 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 GRIA1P42261 906 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 MAGEA9P43362 315 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 MLLT6P55198 1093 aaPredicted RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 DEFB103AP81534 67 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 PIK3R6Q5UE93 754 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 FAM117BQ6P1L5 589 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 C14orf80Q86SX3 495 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 SRRM1Q8IYB3 904 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 PDCD7Q8N8D1 485 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 BCAS4Q8TDM0 211 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 MRRFQ96E11 262 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 SIGLEC10Q96LC7 697 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 C1orf74Q96LT6 269 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 ZNF558Q96NG5 402 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 CYTH2Q99418 400 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 DHRS4Q9BTZ2 278 aa20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 PPANQ9NQ55 473 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 ZC3H7BQ9UGR2 993 aaKnown RBP20.29■□□□□ 0.84
KRT16P3-203ENST00000580621 TCRBV9S1A1TA0A576 114 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 TRIM43BA6NCK2 446 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 VGLL3A8MV65 326 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 TBX18O95935 607 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 CPP00450 1065 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 ZDHHC11BP0C7U3 371 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 MLNP12872 115 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 BRAFP15056 766 aa20.28■□□□□ 0.84
KRT16P3-203ENST00000580621 CSF2RAP15509 400 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms