RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 IGLV3-19P01714 112 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 MMEP08473 750 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 POLR2EP19388 210 aaKnown RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 CD6P30203 668 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 GGCXP38435 758 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 CSKP41240 450 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 GABRB2P47870 512 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 NUMBP49757 651 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 IRAK1P51617 712 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 JAM2P57087 298 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 CDK17Q00537 523 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 NME3Q13232 169 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 NCAPHQ15003 741 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 E2F5Q15329 346 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 STX1AQ16623 288 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 SLC23A3Q6PIS1 610 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 SLC20A1Q8WUM9 679 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 TOE1Q96GM8 510 aaKnown RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 MRGPRX3Q96LB0 322 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 NPY6RQ99463 290 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 PRSS16Q9NQE7 514 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 ANO10Q9NW15 660 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 WSB2Q9NYS7 404 aaPredicted RBP13.11□□□□□ -0.31
SSH2-205ENST00000577483 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 SIK3Q9Y2K2 1263 aa13.11□□□□□ -0.31
SSH2-205ENST00000577483 F5H5T6 163 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 I6L893 689 aaPredicted RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 M0QYT0 321 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 GFPT2O94808 682 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ATP5BP06576 529 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 ADRB1P08588 477 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 C7P10643 843 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ENGP17813 658 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 CCR1P32246 355 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 NOS2P35228 1153 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 HOXD12P35452 270 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 MATKP42679 507 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 NOMO3P69849 1222 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 MYL5Q02045 173 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 CENPCQ03188 943 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 APTXQ7Z2E3 356 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 XYLT1Q86Y38 959 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ZDHHC17Q8IUH5 632 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 APCDD1Q8J025 514 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ZNF557Q8N988 423 aaPredicted RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 IGSF8Q969P0 613 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 GPR174Q9BXC1 333 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 NLRC4Q9NPP4 1024 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 PIGVQ9NUD9 493 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 H0Y626 953 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 NDUFS2O75306 463 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 MBD3O95983 291 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 CFIP05156 583 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ZNF18P17022 549 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ABCB4P21439 1286 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 MAOBP27338 520 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 FLT3P36888 993 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 CXorf57Q6NSI4 855 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 CCAR2Q8N163 923 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 OR52K2Q8NGK3 314 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 C18orf8Q96DM3 657 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 CAPN10Q9HC96 672 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 LIMA1Q9UHB6 759 aaKnown RBP13.1□□□□□ -0.31
SSH2-205ENST00000577483 ERVW-1Q9UQF0 538 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 HS3ST4Q9Y661 456 aa13.1□□□□□ -0.31
SSH2-205ENST00000577483 ADCY5O95622 1261 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 LSM8O95777 96 aaKnown RBP13.09□□□□□ -0.31
SSH2-205ENST00000577483 SLC2A3P11169 496 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 CHRNB2P17787 502 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 DPP6P42658 865 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 MAPK8P45983 427 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 SULT1E1P49888 294 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 SNX16P57768 344 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 RPS14P62263 151 aaKnown RBP13.09□□□□□ -0.31
SSH2-205ENST00000577483 FMO1Q01740 532 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 SYCP1Q15431 976 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
SSH2-205ENST00000577483 PLEKHG6Q3KR16 790 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms