RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ZNF18P17022 549 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 CSKP41240 450 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 CTSOP43234 321 aaPredicted RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 SLC6A3Q01959 620 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 RAPGEF1Q13905 1077 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 C5orf22Q49AR2 442 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 EFHC1Q5JVL4 640 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 CIR1Q86X95 450 aaPredicted RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 ZDHHC17Q8IUH5 632 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 ZNF683Q8IZ20 524 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 APCDD1Q8J025 514 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 LGI2Q8N0V4 545 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 ZNF557Q8N988 423 aaPredicted RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 C1orf216Q8TAB5 229 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 DNASE2BQ8WZ79 361 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 IGSF8Q969P0 613 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 ALG14Q96F25 216 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 SIPA1Q96FS4 1042 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 TOE1Q96GM8 510 aaKnown RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 DDX50Q9BQ39 737 aaKnown RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 CEP83Q9Y592 693 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 ADAMTS9Q9P2N4 1935 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 ITIH6Q6UXX5 1313 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 ASCC3Q8N3C0 2202 aaKnown RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 KCNK5O95279 499 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 TPM2P07951 284 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 CHRNB2P17787 502 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 ENGP17813 658 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 SCNN1AP37088 669 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 RPS14P62263 151 aaKnown RBP17.9■□□□□ 0.46
SMG6-212ENST00000573153 NOMO3P69849 1222 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 ARID5BQ14865 1188 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 C2CD6Q53TS8 623 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 PITRM1Q5JRX3 1037 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 FBXL22Q6P050 247 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 CHSY1Q86X52 802 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 CACUL1Q86Y37 369 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 XYLT1Q86Y38 959 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 SLC20A1Q8WUM9 679 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 VPS16Q9H269 839 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMG6-212ENST00000573153 DDIT4Q9NX09 232 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 TMEM63CQ9P1W3 806 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 CACNA1EQ15878 2313 aa17.9■□□□□ 0.46
SMG6-212ENST00000573153 FAM170AA1A519 330 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 GIPC1O14908 333 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 GJB3O75712 270 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 LSM8O95777 96 aaKnown RBP17.89■□□□□ 0.45
SMG6-212ENST00000573153 APOEP02649 317 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 MMEP08473 750 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 SERPINF2P08697 491 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 PMLP29590 882 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 FLT3P36888 993 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 GGCXP38435 758 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 COPB1P53618 953 aaKnown RBP17.89■□□□□ 0.45
SMG6-212ENST00000573153 BNC1Q01954 994 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 PLEKHG6Q3KR16 790 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 FNDC3BQ53EP0 1204 aaKnown RBP17.89■□□□□ 0.45
SMG6-212ENST00000573153 N4BP2L1Q5TBK1 243 aaPredicted RBP17.89■□□□□ 0.45
SMG6-212ENST00000573153 IL31Q6EBC2 164 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 OR6B2Q6IFH4 312 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 C14orf80Q86SX3 495 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 CARNMT1Q8N4J0 409 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 TMEM35BQ8NCS4 154 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 PRCCQ92733 491 aaPredicted RBP17.89■□□□□ 0.45
SMG6-212ENST00000573153 PGAP3Q96FM1 320 aaPredicted RBP17.89■□□□□ 0.45
SMG6-212ENST00000573153 BPIFA3Q9BQP9 254 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 ORAI3Q9BRQ5 295 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 FAM204AQ9H8W3 233 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 TMEM9BQ9NQ34 198 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 PIGVQ9NUD9 493 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 TMEM59LQ9UK28 342 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 WASF3Q9UPY6 502 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 OR51B4Q9Y5P0 310 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 HS3ST4Q9Y661 456 aa17.89■□□□□ 0.45
SMG6-212ENST00000573153 LGALS16A8MUM7 142 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 SYNCRIPO60506 623 aaKnown RBP17.88■□□□□ 0.45
SMG6-212ENST00000573153 CYP1A1P04798 512 aaPredicted RBP17.88■□□□□ 0.45
SMG6-212ENST00000573153 SLC2A3P11169 496 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 MAOBP27338 520 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 MZF1P28698 734 aaPredicted RBP17.88■□□□□ 0.45
SMG6-212ENST00000573153 ACSL1P33121 698 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 NOS2P35228 1153 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 DPP6P42658 865 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 MATKP42679 507 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 PLK1P53350 603 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 CDK17Q00537 523 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 FMO1Q01740 532 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 CENPCQ03188 943 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 TYRO3Q06418 890 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 MTA1Q13330 715 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 DUOXA1Q1HG43 343 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 HNRNPA1L2Q32P51 320 aaKnown RBP17.88■□□□□ 0.45
SMG6-212ENST00000573153 FKBP15Q5T1M5 1219 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 TAF3Q5VWG9 929 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 ZNF677Q86XU0 584 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 CCAR2Q8N163 923 aaKnown RBP17.88■□□□□ 0.45
SMG6-212ENST00000573153 KDM1BQ8NB78 822 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 ANKRD20A12PQ8NF67 263 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 CADM4Q8NFZ8 388 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms