RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SERPINB5P36952 375 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 PHKA2P46019 1235 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 LRRC8BQ6P9F7 803 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 PLPPR4Q7Z2D5 763 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 FBXO16Q8IX29 292 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-205ENST00000571272 EXOC8Q8IYI6 725 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 CCNYQ8ND76 341 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 TMPRSS4Q9NRS4 437 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 SNX15Q9NRS6 342 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 INPP5FQ9Y2H2 1132 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 SYNJ2BP-COX16A0A087WUM0 186 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 H3BNX3 289 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 RNF103O00237 685 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 AIM2O14862 343 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 MSX2P35548 267 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-205ENST00000571272 TNFAIP2Q03169 654 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 FOLH1Q04609 750 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 DEUP1Q05D60 604 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 DYNC1I2Q13409 638 aaKnown RBP17.91■□□□□ 0.46
SCARF1-205ENST00000571272 LAMB3Q13751 1172 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 LENG8Q96PV6 779 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-205ENST00000571272 COX16Q9P0S2 106 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 ARHGAP26Q9UNA1 814 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 AKT3Q9Y243 479 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 PTPRFP10586 1907 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 MFSD11O43934 449 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 USP12O75317 370 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 MX2P20592 715 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 ADORA2BP29275 332 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 FDFT1P37268 417 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 HARS2P49590 506 aaKnown RBP17.9■□□□□ 0.46
SCARF1-205ENST00000571272 KLF10Q13118 480 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 DLG2Q15700 870 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 HACE1Q8IYU2 909 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 DCLK2Q8N568 766 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 ICA1LQ8NDH6 482 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 RNF217Q8TC41 542 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 P2RY11Q96G91 374 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 OR52B2Q96RD2 323 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 NDNQ99608 321 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 EPAS1Q99814 870 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 CCDC28BQ9BUN5 200 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 DPEP3Q9H4B8 488 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 CAB39LQ9H9S4 337 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 VCX3AQ9NNX9 186 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 CLIC5Q9NZA1 410 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 SCN1AP35498 2009 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 MYL4P12829 197 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 KBTBD6Q86V97 674 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 FCRL3Q96P31 734 aaPredicted RBP17.9■□□□□ 0.46
SCARF1-205ENST00000571272 AGAP3Q96P47 875 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 SPATC1LQ9H0A9 340 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 TBC1D30Q9Y2I9 924 aa17.9■□□□□ 0.46
SCARF1-205ENST00000571272 NEMP1O14524 444 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 SPATA31D3P0C874 917 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 MLNP12872 115 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 ALOX15P16050 662 aaPredicted RBP17.89■□□□□ 0.46
SCARF1-205ENST00000571272 MTTPP55157 894 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 SPATA31D4Q6ZUB0 917 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 RIOX2Q8IUF8 465 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 TP53INP2Q8IXH6 220 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 OR6B3Q8NGW1 331 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 NCSTNQ92542 709 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 NDRG1Q92597 394 aaKnown RBP17.89■□□□□ 0.46
SCARF1-205ENST00000571272 NMD3Q96D46 503 aaKnown RBP17.89■□□□□ 0.46
SCARF1-205ENST00000571272 FAM96AQ9H5X1 160 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 OCEL1Q9H607 264 aa17.89■□□□□ 0.46
SCARF1-205ENST00000571272 DGKIO75912 1065 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 PABPC4LP0CB38 370 aaKnown RBP17.89■□□□□ 0.45
SCARF1-205ENST00000571272 GP5P40197 560 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 ARL4AP40617 200 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 IRF9Q00978 393 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 EN1Q05925 392 aaPredicted RBP17.89■□□□□ 0.45
SCARF1-205ENST00000571272 ANKRD20A4Q4UJ75 823 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 NAT14Q8WUY8 206 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 CERS2Q96G23 380 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 AGAP2Q99490 1192 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 UBE2OQ9C0C9 1292 aaKnown RBP17.89■□□□□ 0.45
SCARF1-205ENST00000571272 WDR55Q9H6Y2 383 aaPredicted RBP17.89■□□□□ 0.45
SCARF1-205ENST00000571272 SSX2IPQ9Y2D8 614 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 HBP1O60381 514 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 PDGFRBP09619 1106 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 CCDC130P13994 396 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 ALDH1A3P47895 512 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 NUDT2P50583 147 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 CHN2P52757 468 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 INSCQ1MX18 579 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 PPM1LQ5SGD2 360 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 EPGNQ6UW88 154 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 NME8Q8N427 588 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 CDH19Q9H159 772 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 SMARCAD1Q9H4L7 1026 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 DTNAQ9Y4J8 743 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 PCDHB12Q9Y5F1 795 aa17.89■□□□□ 0.45
SCARF1-205ENST00000571272 C15orf38-AP3S2A0A0A6YYH1 394 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 SOCS7O14512 581 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 C22orf31O95567 290 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 POLBP06746 335 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms