RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 XXYLT1Q8NBI6 393 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 OR4C6Q8NH72 309 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 OR14C36Q8NHC7 312 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 ZNF507Q8TCN5 953 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 PLD4Q96BZ4 506 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 CCDC97Q96F63 343 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 UCKL1Q9NWZ5 548 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 STRIP2Q9ULQ0 834 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 PMS2P1A4D2B8 440 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 CDRT15L2A8MXV6 281 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 H3BQV1 296 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 FFAR2O15552 330 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 STX6O43752 255 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 C4BPAP04003 597 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 GOT1P17174 413 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 OVGP1Q12889 678 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 ZSCAN23Q3MJ62 389 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 SGO2Q562F6 1265 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 STXBP4Q6ZWJ1 553 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 RSRC2Q7L4I2 434 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 EPM2AIP1Q7L775 607 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 IQCHQ86VS3 1027 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 CCDC65Q8IXS2 484 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 TTC17Q96AE7 1141 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 LMLNQ96KR4 655 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 MRGPRX3Q96LB0 322 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 APOLD1Q96LR9 279 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 FAM129BQ96TA1 746 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 TJP2Q9UDY2 1190 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 STOML2Q9UJZ1 356 aa10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 TPX2Q9ULW0 747 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-202ENST00000570380 SCN8AQ9UQD0 1980 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3DA0A087WVF3 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3IA0A087WXS9 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 A0A087X0B3 334 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3EA0A087X179 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3KA0A087X1G2 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 LY6G6EA0A0G2JKS1 128 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3FA6NER0 549 aaPredicted RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3LB9A6J9 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 EIF3DO15371 548 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 MAGEC1O60732 1142 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 KIF20AO95235 890 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 GP1BAP07359 652 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3HP0C7X1 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 MAT2AP31153 395 aaKnown RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ASPAP45381 313 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 PSMD8P48556 350 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 HARS2P49590 506 aaKnown RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ZNF445P59923 1031 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ST8SIA6P61647 398 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 YWHAGP61981 247 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLDN10P78369 228 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ARID5BQ14865 1188 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 HS1BP3Q53T59 392 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ADGRF1Q5T601 910 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3GQ6DHY5 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3CQ6IPX1 549 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 SPOPLQ6IQ16 392 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 XKR5Q6UX68 686 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 TBC1D3Q8IZP1 549 aaPredicted RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 EXTL1Q92935 676 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ATXN7L3BQ96GX2 97 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLIC6Q96NY7 704 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 CCNL2Q96S94 520 aaPredicted RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 DUSP16Q9BY84 665 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 PANK2Q9BZ23 570 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ABCG4Q9H172 646 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 FBXO2Q9UK22 296 aaPredicted RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 INTS6Q9UL03 887 aaKnown RBP10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 CA5BQ9Y2D0 317 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 PCDHGA8Q9Y5G5 932 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 ENTPD2Q9Y5L3 495 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 U3KQA8 63 aa10.85□□□□□ -0.67
CTDNEP1-202ENST00000570380 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 TARSL2A2RTX5 802 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 LRRIQ3A6PVS8 624 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 TTC34A8MYJ7 566 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 P4HA1P13674 534 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 CR2P20023 1033 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 C5AR1P21730 350 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 TGM2P21980 687 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 DRD3P35462 400 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 CSKP41240 450 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 STAT6P42226 847 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 AP3M2P53677 418 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 TLE1Q04724 770 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 INCA1Q0VD86 236 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 STAT4Q14765 748 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLEC14AQ86T13 490 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 NELFCDQ8IXH7 590 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 STK40Q8N2I9 435 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 ARHGAP18Q8N392 663 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms