RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 DSTYKQ6XUX3 929 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 BNIPLQ7Z465 357 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 PIGZQ86VD9 579 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 ZNF296Q8WUU4 475 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-214ENST00000567572 OXNAD1Q96HP4 312 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-214ENST00000567572 C12orf65Q9H3J6 166 aaKnown RBP18.23■□□□□ 0.51
CMTM3-214ENST00000567572 DCLRE1BQ9H816 532 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 FZD10Q9ULW2 581 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 RAD54BQ9Y620 910 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 MAD1L1Q9Y6D9 718 aa18.23■□□□□ 0.51
CMTM3-214ENST00000567572 CLDN5O00501 218 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 DIAPH2O60879 1101 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 GNAZP19086 355 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 SERPINB3P29508 390 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 TUSC3Q13454 348 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 CRYMQ14894 314 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 TIGD5Q53EQ6 642 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 CDHR3Q6ZTQ4 885 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 CLEC20AQ6ZU45 233 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 DEPDC1BQ8WUY9 529 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 KCTD13Q8WZ19 329 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 NT5C3BQ969T7 300 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 SYT15Q9BQS2 421 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 STN1Q9H668 368 aaKnown RBP18.22■□□□□ 0.51
CMTM3-214ENST00000567572 STARD7Q9NQZ5 370 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 RGS18Q9NS28 235 aa18.22■□□□□ 0.51
CMTM3-214ENST00000567572 SDR42E2A6NKP2 422 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 MYL2P10916 166 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 TFE3P19532 575 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-214ENST00000567572 TMPRSS15P98073 1019 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 ARHGEF6Q15052 776 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 PDK1Q15118 436 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 TEX44Q53QW1 395 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 ANKRD20A2Q5SQ80 823 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 ANKRD20A1Q5TYW2 823 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 CD300LGQ6UXG3 332 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 STAP1Q9ULZ2 295 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 SORCS3Q9UPU3 1222 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 PHF24Q9UPV7 400 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 TIMM13Q9Y5L4 95 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-214ENST00000567572 LIN7AO14910 233 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-214ENST00000567572 SNNO75324 88 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-214ENST00000567572 BEST1O76090 585 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 BPGMP07738 259 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 TPBGLP0DKB5 382 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 PGAM1P18669 254 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 ADIGQ0VDE8 80 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 BST1Q10588 318 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 SYCP2LQ5T4T6 812 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 C4orf50Q6ZRC1 276 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 CRLF3Q8IUI8 442 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 NUDCD3Q8IVD9 361 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 CCDC185Q8N715 623 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 UROC1Q96N76 676 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 NUDCD1Q96RS6 583 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 FAM96AQ9H5X1 160 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 ALG13Q9NP73 1137 aaKnown RBP18.21■□□□□ 0.51
CMTM3-214ENST00000567572 ARHGEF4Q9NR80 690 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 CDH9Q9ULB4 789 aa18.21■□□□□ 0.51
CMTM3-214ENST00000567572 C9IYK1 514 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 ARVCFO00192 962 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 ODC1P11926 461 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 PAX3P23760 479 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 NOS2P35228 1153 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 CLNS1AP54105 237 aaKnown RBP18.2■□□□□ 0.5
CMTM3-214ENST00000567572 NIPAL4Q0D2K0 466 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 RTN4RL1Q86UN2 441 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-214ENST00000567572 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.2■□□□□ 0.5
CMTM3-214ENST00000567572 NDUFAF2Q8N183 169 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 STKLD1Q8NE28 680 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 ARMC2Q8NEN0 867 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 LINC01599Q8WXQ3 324 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 ATP2A3Q93084 1043 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 MIPEPQ99797 713 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 KRT82Q9NSB4 513 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 ARL8BQ9NVJ2 186 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 IGSF9Q9P2J2 1179 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 INPP5FQ9Y2H2 1132 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 NUMBLQ9Y6R0 609 aa18.2■□□□□ 0.5
CMTM3-214ENST00000567572 MYBPHLA2RUH7 354 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 M0QZQ0 153 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 FCHO1O14526 889 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 GYG2O15488 501 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 GLRA3O75311 464 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 B3GAT3O94766 335 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 CYP11A1P05108 521 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 FAM200BP0CF97 657 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 ESRRAP11474 423 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 GOT1P17174 413 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 IBSPP21815 317 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 GCKP35557 465 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 SULT1E1P49888 294 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 WASHC5Q12768 1159 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 FRG1Q14331 258 aaKnown RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 PAFAH1B3Q15102 231 aaKnown RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 INSCQ1MX18 579 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 TRMT10BQ6PF06 316 aaKnown RBP18.19■□□□□ 0.5
CMTM3-214ENST00000567572 FAM35AQ86V20 835 aa18.19■□□□□ 0.5
CMTM3-214ENST00000567572 PCED1BQ96HM7 432 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms