RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ADGRF4Q8IZF3 695 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 C17orf50Q8WW18 174 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 TRIM43Q96BQ3 446 aaPredicted RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CFAP36Q96G28 342 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CCDC43Q96MW1 224 aaKnown RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 HTATIP2Q9BUP3 242 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 TRIM9Q9C026 710 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 YY1AP1Q9H869 796 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 TOR4AQ9NXH8 423 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CACNA2D2Q9NY47 1150 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 SMG5Q9UPR3 1016 aaKnown RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 GOLGA6L9A6NEM1 432 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 ZBTB42B2RXF5 422 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 TMEM233B4DJY2 109 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 STMND1H3BQB6 276 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 PSMA7O14818 248 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 CA12O43570 354 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 TPM1P09493 284 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 PPARGP37231 505 aaPredicted RBP11.05□□□□□ -0.64
UBFD1-205ENST00000566136 LGALS4P56470 323 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 MPP3Q13368 585 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 SLC39A12Q504Y0 691 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 MBNL2Q5VZF2 373 aaKnown RBP11.05□□□□□ -0.64
UBFD1-205ENST00000566136 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 METTL6Q8TCB7 284 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
UBFD1-205ENST00000566136 PGAP3Q96FM1 320 aaPredicted RBP11.05□□□□□ -0.64
UBFD1-205ENST00000566136 TRIM7Q9C029 511 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 PRDM8Q9NQV8 689 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 EXOC1Q9NV70 894 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 ZDHHC3Q9NYG2 299 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 TBC1D14Q9P2M4 693 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 DAPP1Q9UN19 280 aa11.05□□□□□ -0.64
UBFD1-205ENST00000566136 ESYT2A0FGR8 921 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 CD83Q01151 205 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 STIM1Q13586 685 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 ZBTB37Q5TC79 503 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 HDXQ7Z353 690 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 THAP4Q8WY91 577 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 CASP10Q92851 521 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 ABHD8Q96I13 439 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 RCC1LQ96I51 464 aaKnown RBP11.04□□□□□ -0.64
UBFD1-205ENST00000566136 APOPT1Q96IL0 206 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 GBP5Q96PP8 586 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 PRPF18Q99633 342 aaKnown RBP11.04□□□□□ -0.64
UBFD1-205ENST00000566136 EPC1Q9H2F5 836 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 DCDC2BA2VCK2 349 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 MPOP05164 745 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 PTPN2P17706 415 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 TGM1P22735 817 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 FKBP1BP68106 108 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 HYAL2Q12891 473 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 SUZ12Q15022 739 aaKnown RBP11.04□□□□□ -0.64
UBFD1-205ENST00000566136 TPGS2Q68CL5 300 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 TTI2Q6NXR4 508 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 KCNV1Q6PIU1 500 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 JAM3Q9BX67 310 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 PBX4Q9BYU1 374 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 CHODLQ9H9P2 273 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 LRWD1Q9UFC0 647 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 DNAJC16Q9Y2G8 782 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 TMED5Q9Y3A6 229 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 PAPPA2Q9BXP8 1791 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 MYH4Q9Y623 1939 aa11.04□□□□□ -0.64
UBFD1-205ENST00000566136 ACTL6BO94805 426 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 ASMTP46597 345 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 OR1G1P47890 313 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 TBC1D8BQ0IIM8 1120 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 MYO1EQ12965 1108 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 UGT8Q16880 541 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 GEN1Q17RS7 908 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 LEXMQ3ZCV2 418 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 ZRANB3Q5FWF4 1079 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 FAXCQ5TGI0 409 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 ANKRD40Q6AI12 368 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 UNC13DQ70J99 1090 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CYFIP1Q7L576 1253 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 DYMQ7RTS9 669 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CSGALNACT2Q8N6G5 542 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 C10orf53Q8N6V4 93 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 FIBINQ8TAL6 211 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 MTMR9Q96QG7 549 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 CITED2Q99967 270 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 BOCQ9BWV1 1114 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 B3GNT4Q9C0J1 378 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 SYNCQ9H7C4 482 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 SLC39A2Q9NP94 309 aa11.03□□□□□ -0.64
UBFD1-205ENST00000566136 POLR3BQ9NW08 1133 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-205ENST00000566136 TAS2R3Q9NYW6 316 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms