RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 TMEM196Q5HYL7 178 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 DGKKQ5KSL6 1271 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 C1orf228Q6PIY5 440 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 DGLUCYQ7Z3D6 616 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 PSTKQ8IV42 348 aaKnown RBP26.82■■□□□ 1.88
NME3-208ENST00000565379 RNF10Q8N5U6 811 aaKnown RBP26.82■■□□□ 1.88
NME3-208ENST00000565379 IER2Q9BTL4 223 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 LACRTQ9GZZ8 138 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 NCDNQ9UBB6 729 aa26.82■■□□□ 1.88
NME3-208ENST00000565379 ANTXRLA6NF34 631 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 CHURC1-FNTBB4DL54 471 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 LRCH4O75427 683 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 MOCS2O96007 188 aaPredicted RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 ADH1CP00326 375 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 FNTBP49356 437 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 ATXN1P54253 815 aaKnown RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 NAP1L1P55209 391 aaKnown RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 AMPD2Q01433 879 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 LPAL2Q16609 132 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 HADHQ16836 314 aaKnown RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 HEATR6Q6AI08 1181 aaKnown RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 SCYL2Q6P3W7 929 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 SLFN11Q7Z7L1 901 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 GPR161Q8N6U8 529 aaKnown RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 BTBD6Q96KE9 485 aa26.81■■□□□ 1.88
NME3-208ENST00000565379 SMG5Q9UPR3 1016 aaKnown RBP26.81■■□□□ 1.88
NME3-208ENST00000565379 TRDMT1O14717 391 aaKnown RBP26.8■■□□□ 1.88
NME3-208ENST00000565379 PAGE1O75459 146 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 CYBBP04839 570 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 MIPP30301 263 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 GALK1P51570 392 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 MESDQ14696 234 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 BOLA3Q53S33 107 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 ZNF830Q96NB3 372 aaPredicted RBP26.8■■□□□ 1.88
NME3-208ENST00000565379 OSBPL2Q9H1P3 480 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 EPC1Q9H2F5 836 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 SPHK2Q9NRA0 654 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 DLL3Q9NYJ7 618 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 USP18Q9UMW8 372 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 TFR2Q9UP52 801 aa26.8■■□□□ 1.88
NME3-208ENST00000565379 ZSCAN12O43309 604 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 DHCR24Q15392 516 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 GAB4Q2WGN9 574 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 MS4A13Q5J8X5 152 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 EFHC2Q5JST6 749 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 C11orf63Q6NUN7 778 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 ARFGAP1Q8N6T3 406 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 UBE2Q2Q8WVN8 375 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 MARK1Q9P0L2 795 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 PPP2R2CQ9Y2T4 447 aa26.79■■□□□ 1.88
NME3-208ENST00000565379 TYW5A2RUC4 315 aaKnown RBP26.78■■□□□ 1.88
NME3-208ENST00000565379 F5H5T6 163 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 TACR2P21452 398 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 NRLP54845 237 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 NRG1Q02297 640 aaPredicted RBP26.78■■□□□ 1.88
NME3-208ENST00000565379 GAD2Q05329 585 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 MPPE1Q53F39 396 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 FAM133BQ5BKY9 247 aaKnown RBP26.78■■□□□ 1.88
NME3-208ENST00000565379 MPP7Q5T2T1 576 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 ERMARDQ5T6L9 678 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 TTC39BQ5VTQ0 682 aaPredicted RBP26.78■■□□□ 1.88
NME3-208ENST00000565379 NADSYN1Q6IA69 706 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 TPCN2Q8NHX9 752 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 EXOC4Q96A65 974 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 P2RY13Q9BPV8 354 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 FZD10Q9ULW2 581 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 HS3ST4Q9Y661 456 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 SDK1Q7Z5N4 2213 aa26.78■■□□□ 1.88
NME3-208ENST00000565379 GFRA2O00451 464 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 HOXC11O43248 304 aaPredicted RBP26.77■■□□□ 1.88
NME3-208ENST00000565379 RNF40O75150 1001 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 PXNP49023 591 aaPredicted RBP26.77■■□□□ 1.88
NME3-208ENST00000565379 ZNF135P52742 658 aaPredicted RBP26.77■■□□□ 1.88
NME3-208ENST00000565379 GRSF1Q12849 480 aaKnown RBP eCLIP26.77■■□□□ 1.88
NME3-208ENST00000565379 RAB6CQ53S08 254 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 RABGAP1LQ5R372 815 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 RHBDF2Q6PJF5 856 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 LRRC31Q6UY01 552 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 CHSY1Q86X52 802 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 SYCE1Q8N0S2 351 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 CCDC185Q8N715 623 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 TEKT4Q8WW24 435 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 PRMT1Q99873 361 aaKnown RBP26.77■■□□□ 1.88
NME3-208ENST00000565379 RAB6CQ9H0N0 254 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 XPO7Q9UIA9 1087 aaKnown RBP26.77■■□□□ 1.88
NME3-208ENST00000565379 DUSP10Q9Y6W6 482 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 MYOFQ9NZM1 2061 aa26.77■■□□□ 1.88
NME3-208ENST00000565379 BUB1BO60566 1050 aaPredicted RBP26.76■■□□□ 1.87
NME3-208ENST00000565379 CYP17A1P05093 508 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 KRT7P08729 469 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 AUHQ13825 339 aaKnown RBP26.76■■□□□ 1.87
NME3-208ENST00000565379 LY6G5CQ5SRR4 150 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 PIK3R6Q5UE93 754 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 RAP1GAP2Q684P5 730 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 ZNF557Q8N988 423 aaPredicted RBP26.76■■□□□ 1.87
NME3-208ENST00000565379 HJURPQ8NCD3 748 aaPredicted RBP26.76■■□□□ 1.87
NME3-208ENST00000565379 TMA16Q96EY4 203 aaKnown RBP26.76■■□□□ 1.87
NME3-208ENST00000565379 RETREG1Q9H6L5 497 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 ANLNQ9NQW6 1124 aa26.76■■□□□ 1.87
NME3-208ENST00000565379 PCSK1NQ9UHG2 260 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms