RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 INPP5JQ15735 1006 aaPredicted RBP5.42□□□□□ -1.54
UBR1-205ENST00000564540 ODF3L2Q3SX64 289 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 TTLL5Q6EMB2 1281 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 RFX8Q6ZV50 586 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 B4GALNT4Q76KP1 1039 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 FAM47BQ8NA70 645 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 CAMK1GQ96NX5 476 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 SLC8A2Q9UPR5 921 aa5.42□□□□□ -1.54
UBR1-205ENST00000564540 A0A087WV62 115 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 GOLGA6L3A6NEY3 463 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 LGALS16A8MUM7 142 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 FFAR2O15552 330 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 PLIN1O60240 522 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 ALDOAP04075 364 aaKnown RBP5.41□□□□□ -1.54
UBR1-205ENST00000564540 CYP3A4P08684 503 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 GYS1P13807 737 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 CIITAP33076 1130 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 GRK5P34947 590 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 ALDH7A1P49419 539 aaKnown RBP5.41□□□□□ -1.54
UBR1-205ENST00000564540 RNASELQ05823 741 aaKnown RBP5.41□□□□□ -1.54
UBR1-205ENST00000564540 SF3A3Q12874 501 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBR1-205ENST00000564540 DLGAP5Q15398 846 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 PRTGQ2VWP7 1150 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 LRIG3Q6UXM1 1119 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 MORC1Q86VD1 984 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 DDIASQ8IXT1 998 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 SAMD14Q8IZD0 417 aaPredicted RBP5.41□□□□□ -1.54
UBR1-205ENST00000564540 PAQR4Q8N4S7 273 aaPredicted RBP5.41□□□□□ -1.54
UBR1-205ENST00000564540 ZNF527Q8NB42 609 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 FAM71BQ8TC56 605 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 CLEC4CQ8WTT0 213 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 KAT2AQ92830 837 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 HTATIP2Q9BUP3 242 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 SFXN1Q9H9B4 322 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 DECR2Q9NUI1 292 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 CNTN6Q9UQ52 1028 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 LAMP3Q9UQV4 416 aa5.41□□□□□ -1.54
UBR1-205ENST00000564540 LMTK3Q96Q04 1460 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 DPPA5A6NC42 116 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 SLC38A8A6NNN8 435 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 RHODO00212 210 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 NFATC1O95644 943 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 CHRNB1P11230 501 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 PDIA3P30101 505 aaKnown RBP5.4□□□□□ -1.54
UBR1-205ENST00000564540 GALNT1Q10472 559 aaPredicted RBP5.4□□□□□ -1.54
UBR1-205ENST00000564540 ZNF569Q5MCW4 686 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 C6orf10Q5SRN2 563 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 ASPHD1Q5U4P2 390 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 ZNF517Q6ZMY9 492 aaPredicted RBP5.4□□□□□ -1.54
UBR1-205ENST00000564540 PELI3Q8N2H9 469 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 TMEM199Q8N511 208 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 ADPRHL1Q8NDY3 354 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 IP6K1Q92551 441 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 ATP2A3Q93084 1043 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 PCGF6Q9BYE7 350 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 NFU1Q9UMS0 254 aa5.4□□□□□ -1.54
UBR1-205ENST00000564540 ZNF335Q9H4Z2 1342 aaPredicted RBP5.4□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3DA0A087WVF3 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3IA0A087WXS9 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3EA0A087X179 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3KA0A087X1G2 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3BA6NDS4 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 FAM90A18PA6NE21 464 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 CXorf65A6NEN9 183 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3FA6NER0 549 aaPredicted RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 FAM90A16PA6NEW6 464 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 C3orf70A6NLC5 250 aaPredicted RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 FAM90A9PA6NNJ1 464 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 FAM90A5PA8MXJ8 464 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3LB9A6J9 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 OAZ2O95190 189 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 SYF2O95926 243 aaKnown RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 ALPLP05186 524 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 FAM90A15PP0C7V4 464 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 FAM90A14PP0C7W9 464 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3HP0C7X1 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 RBM6P78332 1123 aaKnown RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 GAD2Q05329 585 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 PTK2BQ14289 1009 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 PFKFB4Q16877 469 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 ARL13AQ5H913 290 aaPredicted RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3GQ6DHY5 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3CQ6IPX1 549 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 ZNF549Q6P9A3 640 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 C9orf47Q6ZRZ4 202 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TOGARAM2Q6ZUX3 1019 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 RTL10Q7L3V2 364 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 MDGA2Q7Z553 956 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TBC1D3Q8IZP1 549 aaPredicted RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 ADAD1Q96M93 576 aaKnown RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 SORBS1Q9BX66 1292 aaKnown RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 WDR12Q9GZL7 423 aaKnown RBP5.39□□□□□ -1.55
UBR1-205ENST00000564540 IL21RQ9HBE5 538 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 TXNRD2Q9NNW7 524 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 ANAPC4Q9UJX5 808 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 FBXO4Q9UKT5 387 aa5.39□□□□□ -1.55
UBR1-205ENST00000564540 LZTS1Q9Y250 596 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms