RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CPOXP36551 454 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 AVPR1AP37288 418 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 RBP5P82980 135 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 SLC6A3Q01959 620 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 KLF10Q13118 480 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 MPP3Q13368 585 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 RBM44Q6ZP01 1051 aaKnown RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 PTAR1Q7Z6K3 402 aaPredicted RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 TDRD5Q8NAT2 981 aaKnown RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 JADE3Q92613 823 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 IFT43Q96FT9 208 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 TEPSINQ96N21 525 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 CATSPER2Q96P56 530 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 SERPINI1Q99574 410 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 PRPF18Q99633 342 aaKnown RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 SLC39A10Q9ULF5 831 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 CDY2AQ9Y6F7 541 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 CDY1Q9Y6F8 540 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 LY75O60449 1722 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 KIAA1217Q5T5P2 1943 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 AMHP03971 560 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 TPH1P17752 444 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 CYP3A5P20815 502 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 PCLAFQ15004 111 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 SLC9B1Q4ZJI4 515 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 FBXW8Q8N3Y1 598 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 DCLK2Q8N568 766 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 MCUQ8NE86 351 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 ZSCAN18Q8TBC5 510 aaPredicted RBP12.12□□□□□ -0.47
ABCA3-203ENST00000563623 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 TCF7L2Q9NQB0 619 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 COPG2Q9UBF2 871 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 ITGA11Q9UKX5 1188 aa12.12□□□□□ -0.47
ABCA3-203ENST00000563623 PAPSS1O43252 624 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 HCRTO43612 131 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 BUD23O43709 281 aaKnown RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 PEX1O43933 1283 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 POLBP06746 335 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 NELFEP18615 380 aaKnown RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 PPM1LQ5SGD2 360 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 OR52K1Q8NGK4 314 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 SGF29Q96ES7 293 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 TASP1Q9H6P5 420 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 PLAC1Q9HBJ0 212 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 A0A096LPK6 155 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 GRM1Q13255 1194 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 TARBP2Q15633 366 aaKnown RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 FAM91A1Q658Y4 838 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 CCDC185Q8N715 623 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 APBB2Q92870 758 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 OR52B2Q96RD2 323 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 TMPRSS4Q9NRS4 437 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 DDX43Q9NXZ2 648 aaKnown RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 ZSCAN9O15535 394 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 FAM189A1O60320 539 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 IL1BP01584 269 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 CNTFP26441 200 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 CCR10P46092 362 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 GMPSP49915 693 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 HDAC4P56524 1084 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 MSLNQ13421 630 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 DCAF6Q58WW2 860 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 DCUN1D1Q96GG9 259 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 MRPL45Q9BRJ2 306 aaKnown RBP12.11□□□□□ -0.47
ABCA3-203ENST00000563623 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 C1orf21Q9H246 121 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 CYP3A43Q9HB55 503 aa12.11□□□□□ -0.47
ABCA3-203ENST00000563623 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 CCDC130P13994 396 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 MPSTP25325 297 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 FDFT1P37268 417 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 GP5P40197 560 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 SULT1E1P49888 294 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 TMED1Q13445 227 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 RNF111Q6ZNA4 994 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 PLD6Q8N2A8 252 aaKnown RBP12.1□□□□□ -0.47
ABCA3-203ENST00000563623 FAM156AQ8NDB6 213 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 CSPG4P5Q96PW8 444 aa12.1□□□□□ -0.47
ABCA3-203ENST00000563623 PDGFDQ9GZP0 370 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms