RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ELAC1Q9H777 363 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 LIN7CQ9NUP9 197 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 NDUFAF4Q9P032 175 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 MAFFQ9ULX9 164 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 MBD3L5A6NJ08 208 aaPredicted RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 A6NLC8 198 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 TTC34A8MYJ7 566 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 TMEM232C9JQI7 657 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 H0Y3Z8 333 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SMIM22K7EJ46 135 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 PRYO14603 147 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CD4P01730 458 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 IFIT1P09914 478 aaKnown RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 PEPDP12955 493 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 NDUFS1P28331 727 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 HOXD12P35452 270 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 ADD2P35612 726 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 LIFRP42702 1097 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC14A1Q13336 389 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 PDCLQ13371 301 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CNGA3Q16281 694 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CERKLQ49MI3 558 aaPredicted RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 MTX3Q5HYI7 312 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF569Q5MCW4 686 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 WDR93Q6P2C0 686 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF782Q6ZMW2 699 aaPredicted RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SYT13Q7L8C5 426 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 BHLHA9Q7RTU4 235 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CPOQ8IVL8 374 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 C9orf106Q8NAJ2 232 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 C8orf58Q8NAV2 365 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 OR6Y1Q8NGX8 325 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CEP70Q8NHQ1 597 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC2A12Q8TD20 617 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CPT1BQ92523 772 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF845Q96IR2 970 aaPredicted RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 MAELQ96JY0 434 aaKnown RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 NPAS1Q99742 590 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SENP7Q9BQF6 1050 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 ELOVL1Q9BW60 279 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 GATA5Q9BWX5 397 aaPredicted RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SEMA4CQ9C0C4 833 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 ABHD16BQ9H3Z7 469 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 G6PC2Q9NQR9 355 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 TMLHEQ9NVH6 421 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 VPS4AQ9UN37 437 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SIRT4Q9Y6E7 314 aaPredicted RBP3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SPATA31A5Q5VU36 1347 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 SPATA31A7Q8IWB4 1347 aa3.65□□□□□ -1.83
SHCBP1-202ENST00000563219 CYP3A7-CYP3A51PA0A087WV96 503 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 C3orf70A6NLC5 250 aaPredicted RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 C16orf96A6NNT2 1141 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 LDHCP07864 332 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 PRR35P0CG20 571 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 CYP2D6P10635 497 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 CYP2A6P11509 494 aaPredicted RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 XBP1P17861 261 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 KELP23276 732 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 CYP3A7P24462 503 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 SERPINA4P29622 427 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 SLC8A1P32418 973 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 STAT6P42226 847 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 AARSP49588 968 aaKnown RBP eCLIP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 MCM2P49736 904 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 AGTR2P50052 363 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF84P51523 738 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 RNASELQ05823 741 aaKnown RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 EFR3AQ14156 821 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 SMAD1Q15797 465 aaKnown RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 FAM110CQ1W6H9 321 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 GALNTL6Q49A17 601 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 TMEM119Q4V9L6 283 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 FBXO47Q5MNV8 452 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF626Q68DY1 528 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ANKRD40Q6AI12 368 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 C11orf87Q6NUJ2 197 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 RETSATQ6NUM9 610 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 RANBP10Q6VN20 620 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF813Q6ZN06 617 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 NME8Q8N427 588 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF366Q8N895 744 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 PNLDC1Q8NA58 520 aaKnown RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 IL17REQ8NFR9 667 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 RRP36Q96EU6 259 aaKnown RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 PPM1MQ96MI6 270 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 CHODLQ9H9P2 273 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 PDP2Q9P2J9 529 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF69Q9UC07 566 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 KCND3Q9UK17 655 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 RAB21Q9UL25 225 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 TRPC5Q9UL62 973 aaPredicted RBP3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 ARHGAP26Q9UNA1 814 aa3.64□□□□□ -1.83
SHCBP1-202ENST00000563219 A0A1B0GVC2 190 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 FAM90A20PA6NIJ5 464 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 HEXIM1O94992 359 aaKnown RBP3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 KAT7O95251 611 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 SGPL1O95470 568 aa3.63□□□□□ -1.83
SHCBP1-202ENST00000563219 TBX18O95935 607 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms