RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PAK5Q9P286 719 aa14.71□□□□□ -0.05
COMMD4-205ENST00000562310 SHOC2Q9UQ13 582 aa14.71□□□□□ -0.05
COMMD4-205ENST00000562310 MKI67P46013 3256 aaKnown RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 C2orf78A6NCI8 922 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 SOBPA7XYQ1 873 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 ACSL4O60488 711 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 CSPG5O95196 566 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 MBL2P11226 248 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 RHOQP17081 205 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 BMP8BP34820 402 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 GGCXP38435 758 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 VPS41P49754 854 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 PLTPP55058 493 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 GALNT2Q10471 571 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 AUHQ13825 339 aaKnown RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 MORF4L2Q15014 288 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 TRIP13Q15645 432 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 CHSY1Q86X52 802 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 LRRC49Q8IUZ0 686 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 ZNF683Q8IZ20 524 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 HDAC11Q96DB2 347 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 PRMT1Q99873 361 aaKnown RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 KLF16Q9BXK1 252 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 NKX2-4Q9H2Z4 354 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 VIPAS39Q9H9C1 493 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 USP29Q9HBJ7 922 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 TRPC7Q9HCX4 862 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 XPO7Q9UIA9 1087 aaKnown RBP14.7□□□□□ -0.06
COMMD4-205ENST00000562310 ZMYM5Q9UJ78 669 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 ANAPC5Q9UJX4 755 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 MFHAS1Q9Y4C4 1052 aa14.7□□□□□ -0.06
COMMD4-205ENST00000562310 TRAV19A0A0A6YYK7 116 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 C5orf60A6NFR6 353 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 F5H5T6 163 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 CCL16O15467 120 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 STC2O76061 302 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 PTPN2P17706 415 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 TACR2P21452 398 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 RBL1P28749 1068 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 RPL22P35268 128 aaKnown RBP14.69□□□□□ -0.06
COMMD4-205ENST00000562310 PBX2P40425 430 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 KCNQ1P51787 676 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 ITGA8P53708 1063 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 GDF10P55107 478 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 SLC7A9P82251 487 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 PPIDQ08752 370 aaKnown RBP14.69□□□□□ -0.06
COMMD4-205ENST00000562310 CASP8Q14790 479 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 ARHGAP15Q53QZ3 475 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 HABP4Q5JVS0 413 aaKnown RBP14.69□□□□□ -0.06
COMMD4-205ENST00000562310 SPDYCQ5MJ68 293 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 RABGAP1LQ5R372 815 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 RAP1GAP2Q684P5 730 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 HOOK3Q86VS8 718 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 NPWQ8N729 165 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 FBXO25Q8TCJ0 367 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 HTR3CQ8WXA8 447 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 CORO1BQ9BR76 489 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 NEUROG2Q9H2A3 272 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 SLC28A3Q9HAS3 691 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 TMEM248Q9NWD8 314 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 ZNF446Q9NWS9 450 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 VANGL2Q9ULK5 521 aa14.69□□□□□ -0.06
COMMD4-205ENST00000562310 TPX2Q9ULW0 747 aaKnown RBP14.69□□□□□ -0.06
COMMD4-205ENST00000562310 A0A0A0MRY4 1105 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 DRGXA6NNA5 263 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 OPHN1O60890 802 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 GCATO75600 419 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 MAP3K6O95382 1288 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 MYL4P12829 197 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 EPCAMP16422 314 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 HDCP19113 662 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 CORO1AP31146 461 aaKnown RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 HSPA9P38646 679 aaKnown RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 GARSP41250 739 aaKnown RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 MAPKAPK2P49137 400 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 NDST2P52849 883 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 SLMAPQ14BN4 828 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 C5orf22Q49AR2 442 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 ARTNQ5T4W7 220 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 TTC39BQ5VTQ0 682 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 HIBCHQ6NVY1 386 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 FBXL22Q6P050 247 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 RHBDF2Q6PJF5 856 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 GAREM2Q75VX8 874 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 C14orf80Q86SX3 495 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 NLRP14Q86W24 1093 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 PPIL6Q8IXY8 311 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 HS6ST3Q8IZP7 471 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 UMODL1-AS1Q8N2C9 162 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 GLIS1Q8NBF1 620 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 PPP2R3CQ969Q6 453 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 SPATA13Q96N96 652 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 RPRD1AQ96P16 312 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 CDCA3Q99618 268 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-205ENST00000562310 FUT8Q9BYC5 575 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 PHACTR1Q9C0D0 580 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 KLC2Q9H0B6 622 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 ATXN3LQ9H3M9 355 aa14.68□□□□□ -0.06
COMMD4-205ENST00000562310 PRDM12Q9H4Q4 367 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms