RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 TBC1D23Q9NUY8 699 aa6.51□□□□□ -1.37
USP8-210ENST00000560379 POLR3BQ9NW08 1133 aaPredicted RBP6.51□□□□□ -1.37
USP8-210ENST00000560379 HSPBP1Q9NZL4 362 aa6.51□□□□□ -1.37
USP8-210ENST00000560379 RGL1Q9NZL6 768 aa6.51□□□□□ -1.37
USP8-210ENST00000560379 C6orf203Q9P0P8 240 aaPredicted RBP6.51□□□□□ -1.37
USP8-210ENST00000560379 CAPN9O14815 690 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ASNA1O43681 348 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 KLHL41O60662 606 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 FAM155BO75949 473 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ABHD16AO95870 558 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 SRGAP2BP0DMP2 458 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 DDCP20711 480 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 GABRB3P28472 473 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 SREBF1P36956 1147 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 CTCFP49711 727 aaPredicted RBP6.5□□□□□ -1.37
USP8-210ENST00000560379 NLRP5P59047 1200 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 IFI35P80217 286 aaPredicted RBP6.5□□□□□ -1.37
USP8-210ENST00000560379 CTBP1Q13363 440 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 EFR3AQ14156 821 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 SLC44A4Q53GD3 710 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 SLC9C2Q5TAH2 1124 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 KANK2Q63ZY3 851 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 RAB12Q6IQ22 244 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ZER1Q7Z7L7 766 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 SPPL2CQ8IUH8 684 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 FAM126BQ8IXS8 530 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 DENND1AQ8TEH3 1009 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 CREB3L4Q8TEY5 395 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 FAM151AQ8WW52 585 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 TEPSINQ96N21 525 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 YME1L1Q96TA2 773 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ZNF518BQ9C0D4 1074 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 CHST8Q9H2A9 424 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 BOLA2Q9H3K6 86 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ACAD9Q9H845 621 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 CCDC177Q9NQR7 707 aaPredicted RBP6.5□□□□□ -1.37
USP8-210ENST00000560379 TMEM51Q9NW97 253 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ZNF212Q9UDV6 495 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 ZMAT5Q9UDW3 170 aaKnown RBP6.5□□□□□ -1.37
USP8-210ENST00000560379 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 RASAL2Q9UJF2 1139 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 PCDHAC2Q9Y5I4 1007 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 SQORQ9Y6N5 450 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 PTPRFP10586 1907 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 BAZ2AQ9UIF9 1905 aaKnown RBP6.5□□□□□ -1.37
USP8-210ENST00000560379 ZNF532Q9HCE3 1301 aa6.5□□□□□ -1.37
USP8-210ENST00000560379 HMX3A6NHT5 357 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PYCARD-AS1I3L0S3 204 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 CASQ2O14958 399 aaPredicted RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 N4BP3O15049 544 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 SOCS5O75159 536 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PTP4A3O75365 173 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 RTN3O95197 1032 aaPredicted RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 NEFHP12036 1026 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PORP16435 677 aaPredicted RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 CST5P28325 142 aaPredicted RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 MSH2P43246 934 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PIK3CGP48736 1102 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 POLD2P49005 469 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 RNASE9P60153 205 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 POLR2FP61218 127 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 IL13RA1P78552 427 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 CD83Q01151 205 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PPARDQ03181 441 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 ANKRD1Q15327 319 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 SMAD1Q15797 465 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 ADGRF1Q5T601 910 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 LRCH2Q5VUJ6 765 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 CST9Q5W186 159 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 KLHL17Q6TDP4 642 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 IL27RAQ6UWB1 636 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 LIPIQ6XZB0 460 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 ARMC9Q7Z3E5 817 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 ADGRA1Q86SQ6 560 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 GGNQ86UU5 652 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 LURAP1LQ8IV03 231 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 UNC45BQ8IWX7 931 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 CCDC170Q8IYT3 715 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 CCDC150Q8NCX0 1101 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 OR7D4Q8NG98 312 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 FBXO30Q8TB52 745 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 ANKRD49Q8WVL7 239 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PRPF18Q99633 342 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 RIOK1Q9BRS2 568 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 FSD1Q9BTV5 496 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 YY1AP1Q9H869 796 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 BCO1Q9HAY6 547 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 PAPOLBQ9NRJ5 636 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 KRT84Q9NSB2 600 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 USP40Q9NVE5 1235 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 INTS10Q9NVR2 710 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 AATFQ9NY61 560 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP8-210ENST00000560379 HECAQ9UBI9 543 aaPredicted RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 DBR1Q9UK59 544 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 PRDM4Q9UKN5 801 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 CFAP45Q9UL16 551 aa6.49□□□□□ -1.37
USP8-210ENST00000560379 ABT1Q9ULW3 272 aaKnown RBP6.49□□□□□ -1.37
USP8-210ENST00000560379 C2CD2Q9Y426 696 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms