RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 PHF13Q86YI8 300 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 AHI1Q8N157 1196 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 FIBINQ8TAL6 211 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 RXFP2Q8WXD0 754 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 NT5C3BQ969T7 300 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 TTYH3Q9C0H2 523 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 ARRDC1-AS1Q9H2J1 176 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 SMOC1Q9H4F8 434 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 MTG2Q9H4K7 406 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 WDCPQ9H6R7 721 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 IFNKQ9P0W0 207 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 MBD1Q9UIS9 605 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 NUP205Q92621 2012 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 FAM186AA6NE01 2351 aa15.34■□□□□ 0.05
RABGGTA-211ENST00000559850 SKILP12757 684 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 TNFAIP3P21580 790 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 CSKP41240 450 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 CTSOP43234 321 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 AUHQ13825 339 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 EIF4HQ15056 248 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 MAP7D1Q3KQU3 841 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 SFMBT2Q5VUG0 894 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 KIAA1324Q6UXG2 1013 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 MON1BQ7L1V2 547 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 ARMCX6Q7L4S7 300 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM131BQ86XD5 332 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 APCDD1Q8J025 514 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 DEFB119Q8N690 84 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 RPRD1AQ96P16 312 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 SYT11Q9BT88 431 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 IRX2Q9BZI1 471 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 HAUS4Q9H6D7 363 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 ARHGEF38Q9NXL2 777 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 USP18Q9UMW8 372 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 WDR87Q6ZQQ6 2873 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 DOCK4Q8N1I0 1966 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 RIF1Q5UIP0 2472 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 FRYLO94915 3013 aa15.33■□□□□ 0.04
RABGGTA-211ENST00000559850 CNTN5O94779 1100 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 EPHX1P07099 455 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 RETP07949 1114 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 POLR2EP19388 210 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 TGM1P22735 817 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 MZF1P28698 734 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 RDXP35241 583 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 PBX1P40424 430 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 P2RY2P41231 377 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 ENPP2Q13822 863 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 CCDC14Q49A88 953 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 PITRM1Q5JRX3 1037 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 ZNF571Q7Z3V5 609 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 CCDC117Q8IWD4 279 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 RNF214Q8ND24 703 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 OR52K2Q8NGK3 314 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 CPLX3Q8WVH0 158 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 ZC3H10Q96K80 434 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 MRGPRX1Q96LB2 322 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 SELENOOQ9BVL4 669 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 TSPY26PQ9H489 355 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 RRN3Q9NYV6 651 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 CYP8B1Q9UNU6 501 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 ZNF292O60281 2723 aa15.32■□□□□ 0.04
RABGGTA-211ENST00000559850 EP300Q09472 2414 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 C2CD4BA6NLJ0 364 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 MAP3K13O43283 966 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 ATMINO43313 823 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 TIMM44O43615 452 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 SYNCRIPO60506 623 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 EPN2O95208 641 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 DLDP09622 509 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 KRT3P12035 628 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 RRM1P23921 792 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 STARD3Q14849 445 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 ALFQ53S48 1182 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 BRMS1LQ5PSV4 323 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 RABGAP1LQ5R372 815 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 ACAD10Q6JQN1 1059 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 BNIPLQ7Z465 357 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 PGAP3Q96FM1 320 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 MAGEB5Q9BZ81 275 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 XPO4Q9C0E2 1151 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 MKRN2Q9H000 416 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 KIAA1522Q9P206 1035 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 MYO6Q9UM54 1294 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 PLA2G4CQ9UP65 541 aa15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-211ENST00000559850 TCRBV5S1A1TA0A578 114 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 ZBTB24O43167 697 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 RHOBTB1O94844 696 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 CAVIN2O95810 425 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 F9P00740 461 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms