RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 PRCCQ92733 491 aaPredicted RBP8.96□□□□□ -0.98
USP3-208ENST00000558285 FOXJ1Q92949 421 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 SLC39A13Q96H72 371 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 ZC3H10Q96K80 434 aaKnown RBP8.96□□□□□ -0.98
USP3-208ENST00000558285 RPRD1AQ96P16 312 aaPredicted RBP8.96□□□□□ -0.98
USP3-208ENST00000558285 GABRG3Q99928 467 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 SELENOOQ9BVL4 669 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 ADAM22Q9P0K1 906 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 COX16Q9P0S2 106 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 STIM2Q9P246 746 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 SCML1Q9UN30 329 aa8.96□□□□□ -0.98
USP3-208ENST00000558285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.96□□□□□ -0.98
USP3-208ENST00000558285 V9GYY5 206 aaPredicted RBP8.96□□□□□ -0.98
USP3-208ENST00000558285 GOLGA8SH3BPF8 625 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 KIF2AO00139 706 aaPredicted RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 SGK1O00141 431 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 CLDN11O75508 207 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 ERBB2P04626 1255 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 SRPRAP08240 638 aaKnown RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 DLDP09622 509 aaKnown RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 CISD3P0C7P0 127 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 HOXD9P28356 352 aaPredicted RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 UBASH3AP57075 661 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 NOMO3P69849 1222 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 KRT83P78385 493 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 APBA1Q02410 837 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 NCAPHQ15003 741 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 PTPN20Q4JDL3 420 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 SYPL2Q5VXT5 272 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 CCDC112Q8NEF3 446 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 PGAP3Q96FM1 320 aaPredicted RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 AGPAT1Q99943 283 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 ACP6Q9NPH0 428 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 VPS45Q9NRW7 570 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 ABCB8Q9NUT2 735 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 THAP10Q9P2Z0 257 aaPredicted RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 SLC25A13Q9UJS0 675 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 CDV3Q9UKY7 258 aaKnown RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 TPX2Q9ULW0 747 aaKnown RBP8.95□□□□□ -0.98
USP3-208ENST00000558285 NCKAP1Q9Y2A7 1128 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 STON1Q9Y6Q2 735 aa8.95□□□□□ -0.98
USP3-208ENST00000558285 HRO43593 1189 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 GRAP2O75791 330 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 EPN2O95208 641 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CALCAP01258 141 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 IGLV3-25P01717 112 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 EPHX1P07099 455 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MMEP08473 750 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MYBL1P10243 752 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 KRT3P12035 628 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 GNSP15586 552 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MMP8P22894 467 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 AIF1P55008 147 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CENPCQ03188 943 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 TRIM14Q14142 442 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CSRP2Q16527 193 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 FIGNQ5HY92 759 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 WDR45BQ5MNZ6 344 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 C6orf118Q5T5N4 469 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 EGFLAMQ63HQ2 1017 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 MBLAC2Q68D91 279 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 DNAJC24Q6P3W2 148 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 DCUN1D2Q6PH85 259 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 KIAA1324Q6UXG2 1013 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 CYP2U1Q7Z449 544 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 METTL3Q86U44 580 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 XYLT1Q86Y38 959 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 PHF13Q86YI8 300 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 DHX40Q8IX18 779 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 WDTC1Q8N5D0 677 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 FAM160A2Q8N612 972 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 CEP76Q8TAP6 659 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 ADAM32Q8TC27 787 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CPA5Q8WXQ8 436 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 WBP2Q969T9 261 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 PIWIL1Q96J94 861 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 C1orf74Q96LT6 269 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 HAPLN3Q96S86 360 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 PCED1AQ9H1Q7 454 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 PRDM16Q9HAZ2 1276 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 ZNHIT6Q9NWK9 470 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CYTH4Q9UIA0 394 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 CACNA1IQ9P0X4 2223 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 A0A1B0GTH6 734 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 EIF3CLB5ME19 914 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 ATP8B1O43520 1251 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CYP1A1P04798 512 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 FYNP06241 537 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 PNMA6AP0CW24 399 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 PDGFRAP16234 1089 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 NOP2P46087 812 aaKnown RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 PXNP49023 591 aaPredicted RBP8.94□□□□□ -0.98
USP3-208ENST00000558285 CXCR3P49682 368 aa8.94□□□□□ -0.98
USP3-208ENST00000558285 CDH4P55283 916 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms