RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CCNA1P78396 465 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 SHC2P98077 582 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 ZNF169Q14929 603 aaPredicted RBP6.74□□□□□ -1.33
RTF1-204ENST00000558117 IQCB1Q15051 598 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 ANGPT1Q15389 498 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 PRR16Q569H4 304 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 RBM20Q5T481 1227 aaKnown RBP6.74□□□□□ -1.33
RTF1-204ENST00000558117 VPS53Q5VIR6 699 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 PPP4R4Q6NUP7 873 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 TMED8Q6PL24 325 aaPredicted RBP6.74□□□□□ -1.33
RTF1-204ENST00000558117 LAYNQ6UX15 382 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 DPP9Q86TI2 863 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 RPAINQ86UA6 219 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 MYCBPAPQ8TBZ2 947 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 GLT1D1Q96MS3 346 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 TGS1Q96RS0 853 aaKnown RBP6.74□□□□□ -1.33
RTF1-204ENST00000558117 TPSD1Q9BZJ3 242 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 CWC25Q9NXE8 425 aaPredicted RBP6.74□□□□□ -1.33
RTF1-204ENST00000558117 MYO7AQ13402 2215 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 LAMA5O15230 3695 aa6.74□□□□□ -1.33
RTF1-204ENST00000558117 DOCK1Q14185 1865 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 A0A1B0GUL6 1792 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 A0A087WWL8 130 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 CCDC194A0A1B0GVG4 234 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 LINC01553A4QN01 128 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 CCDC151A5D8V7 595 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 GOLIM4O00461 696 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 TBC1D4O60343 1298 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 KRT38O76015 456 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 CHRM2P08172 466 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 ARP10275 920 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 MYF5P13349 255 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 ADORA2AP29274 412 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 CD6P30203 668 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 GYG1P46976 350 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 NANOS3P60323 173 aaKnown RBP6.73□□□□□ -1.33
RTF1-204ENST00000558117 FAM193AP78312 1265 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 SLC13A2Q13183 592 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 SEMA5AQ13591 1074 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 GORABQ5T7V8 394 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 KAZNQ674X7 775 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 LMBRD2Q68DH5 695 aaPredicted RBP6.73□□□□□ -1.33
RTF1-204ENST00000558117 EXOC8Q8IYI6 725 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 FAM84BQ96KN1 310 aaPredicted RBP6.73□□□□□ -1.33
RTF1-204ENST00000558117 OSBPL9Q96SU4 736 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 MYD88Q99836 296 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 NRBP1Q9UHY1 535 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 CTNNA3Q9UI47 895 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 R4GN57 208 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 ABCA12Q86UK0 2595 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 DMXL2Q8TDJ6 3036 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 PIEZO2Q9H5I5 2752 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 SYNRGQ9UMZ2 1314 aa6.73□□□□□ -1.33
RTF1-204ENST00000558117 DDTLA6NHG4 134 aaPredicted RBP6.72□□□□□ -1.33
RTF1-204ENST00000558117 VWC2LB2RUY7 222 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 FRS3O43559 492 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 NCK2O43639 380 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 BRAFP15056 766 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 CST5P28325 142 aaPredicted RBP6.72□□□□□ -1.33
RTF1-204ENST00000558117 PEX2P28328 305 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 CLCN5P51795 746 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 BACE1P56817 501 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 SIM1P81133 766 aaPredicted RBP6.72□□□□□ -1.33
RTF1-204ENST00000558117 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 FMO1Q01740 532 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 SATB1Q01826 763 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 CNGA2Q16280 664 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 ZNF280BQ86YH2 543 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 FAM109AQ8N4B1 249 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 SIMC1Q8NDZ2 872 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 TBC1D22AQ8WUA7 517 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 TFAP2BQ92481 460 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 APIPQ96GX9 242 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 MOGAT1Q96PD6 335 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 APOL5Q9BWW9 433 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 SYNPO2LQ9H987 977 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 SACM1LQ9NTJ5 587 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 TSPYL4Q9UJ04 414 aa6.72□□□□□ -1.33
RTF1-204ENST00000558117 MYO1CO00159 1063 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 TBX10O75333 385 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 ASGR1P07306 291 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 ACTN1P12814 892 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 VIPR2P41587 438 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 SP2Q02086 613 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 CHAF1AQ13111 956 aaPredicted RBP6.71□□□□□ -1.34
RTF1-204ENST00000558117 POLD3Q15054 466 aaPredicted RBP6.71□□□□□ -1.34
RTF1-204ENST00000558117 PTPRRQ15256 657 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 C3orf38Q5JPI3 329 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 TMCO2Q7Z6W1 182 aaPredicted RBP6.71□□□□□ -1.34
RTF1-204ENST00000558117 DEFB128Q7Z7B8 93 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 PEG10Q86TG7 708 aaKnown RBP6.71□□□□□ -1.34
RTF1-204ENST00000558117 CCDC105Q8IYK2 499 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 MPP5Q8N3R9 675 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 SUMF1Q8NBK3 374 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 C17orf80Q9BSJ5 609 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 ACTRT3Q9BYD9 372 aa6.71□□□□□ -1.34
RTF1-204ENST00000558117 OSBPL5Q9H0X9 879 aaPredicted RBP6.71□□□□□ -1.34
RTF1-204ENST00000558117 SERHLQ9NQF3 203 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms