RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FOXQ1Q9C009 403 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 SPTLC3Q9NUV7 552 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 KIAA1522Q9P206 1035 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-234ENST00000557703 TBC1D30Q9Y2I9 924 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 ARIH1Q9Y4X5 557 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-234ENST00000557703 PCDHA13Q9Y5I0 950 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 MYO18AQ92614 2054 aaKnown RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ARHGAP6O43182 974 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ATMINO43313 823 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 LUC7L3O95232 432 aaKnown RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 PDGFBP01127 241 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ASLP04424 464 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ATP5BP06576 529 aaKnown RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 HNRNPLP14866 589 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 HOXA6P31267 233 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 HCAR3P49019 387 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 CCR3P51677 355 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF177Q13360 481 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 SCYL2Q6P3W7 929 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF683Q8IZ20 524 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 NAT16Q8N8M0 369 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 SPC24Q8NBT2 197 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 SLC35G2Q8TBE7 412 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 EPAS1Q99814 870 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 ZYG11BQ9C0D3 744 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 SIK2Q9H0K1 926 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 XPO7Q9UIA9 1087 aaKnown RBP14.12□□□□□ -0.15
SHMT2-234ENST00000557703 FZD10Q9ULW2 581 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 USP18Q9UMW8 372 aa14.12□□□□□ -0.15
SHMT2-234ENST00000557703 GOLGA6L7A0A1B0GV03 622 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 E9PAM4 449 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 H0Y626 953 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 K7EQS6 105 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 FGF10O15520 208 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 TSPAN3O60637 253 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 LRCH4O75427 683 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 PROSCO94903 275 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 GJB6O95452 261 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 KRT7P08729 469 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 MIPP30301 263 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 HOXC13P31276 330 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 SLC6A11P48066 632 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 MAPKAPK2P49137 400 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 VCPP55072 806 aaKnown RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 RPS24P62847 133 aaKnown RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 OGDHQ02218 1023 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 IFI16Q16666 785 aaKnown RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF528Q3MIS6 628 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 C6orf118Q5T5N4 469 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 SH3PXD2AQ5TCZ1 1133 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 MANEALQ5VSG8 457 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 SDE2Q6IQ49 451 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 SYT13Q7L8C5 426 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 C12orf40Q86WS4 652 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 TMEM139Q8IV31 216 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 C1orf210Q8IVY1 113 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 CCAR2Q8N163 923 aaKnown RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 DTWD2Q8NBA8 298 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 PRICKLE1Q96MT3 831 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 CATSPERBQ9H7T0 1116 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 FBRSL1Q9HCM7 1045 aaKnown RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 ELOVL2Q9NXB9 296 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 PLK2Q9NYY3 685 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 STIM2Q9P246 746 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 RCOR3Q9P2K3 495 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 GGA2Q9UJY4 613 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 FBXO4Q9UKT5 387 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 VANGL2Q9ULK5 521 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 PLA2G4CQ9UP65 541 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 MTF2Q9Y483 593 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-234ENST00000557703 CACNA1IQ9P0X4 2223 aa14.11□□□□□ -0.15
SHMT2-234ENST00000557703 CCDC163A0A0D9SF12 145 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 ILVBLA1L0T0 632 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 FAM86C2PA6NEL3 165 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-234ENST00000557703 EGFP01133 1207 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 PABPC1P11940 636 aaKnown RBP14.1□□□□□ -0.15
SHMT2-234ENST00000557703 RHOQP17081 205 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 HLA-FP30511 346 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 KIR2DL1P43626 348 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-234ENST00000557703 ATXN1P54253 815 aaKnown RBP14.1□□□□□ -0.15
SHMT2-234ENST00000557703 NRLP54845 237 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF252P-AS1Q0IIN9 211 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 SEMA3BQ13214 749 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 GSE1Q14687 1217 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 EOGTQ5NDL2 527 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 LRRC38Q5VT99 294 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 POLNQ7Z5Q5 900 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 VSIG1Q86XK7 387 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 LRRC8AQ8IWT6 810 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 CAMKK1Q8N5S9 505 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 TMEM105Q8N8V8 129 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 TTC17Q96AE7 1141 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 TBC1D31Q96DN5 1066 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 ARHGEF26Q96DR7 871 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 PACSIN1Q9BY11 444 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 ZWILCHQ9H900 591 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms