RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 B8ZZF3 427 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 ERVH48-1M5A8F1 160 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 RRP8O43159 456 aaKnown RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 TULP3O75386 442 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 WISP1O95388 367 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 OLFM2O95897 454 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 CD58P19256 250 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 PON1P27169 355 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 ASPAP45381 313 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 MCCD1P59942 119 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 EXOC3L4Q17RC7 722 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 DCAF17Q5H9S7 520 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 CCDC122Q5T0U0 273 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 C10orf76Q5T2E6 689 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 KRT39Q6A163 491 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 PAQR9Q6ZVX9 377 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 TMPRSS12Q86WS5 348 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 C12orf29Q8N999 325 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 SEMA4DQ92854 862 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 NXPE2Q96DL1 559 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 CRACR2AQ9BSW2 395 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 TMEM8AQ9HCN3 771 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 TMEM30AQ9NV96 361 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 WSB2Q9NYS7 404 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 CFAP97Q9P2B7 532 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 HMGXB4Q9UGU5 601 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-230ENST00000557427 STARD13Q9Y3M8 1113 aa13.07□□□□□ -0.32
SHMT2-230ENST00000557427 A0A1B0GVT2 93 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 EFCAB8A8MWE9 144 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 PJA2O43164 708 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 AKR1B10O60218 316 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 ADH1CP00326 375 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 PLEKP08567 350 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 NCAM1P13591 858 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 CCDC130P13994 396 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 CD6P30203 668 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 GTF2H1P32780 548 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 CXADRP78310 365 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 NOP14P78316 857 aaKnown RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 TAF10Q12962 218 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 KLHDC7AQ5VTJ3 777 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 TRMT11Q7Z4G4 463 aaKnown RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 CRYBG2Q8N1P7 616 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 TERB1Q8NA31 727 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 SLC2A14Q8TDB8 520 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 TOE1Q96GM8 510 aaKnown RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 GABRG3Q99928 467 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 DEF6Q9H4E7 631 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 GUCA1BQ9UMX6 200 aa13.06□□□□□ -0.32
SHMT2-230ENST00000557427 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
SHMT2-230ENST00000557427 MYH10P35580 1976 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 ZNF840PA6NDX5 716 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 MEI4A8MW99 385 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 WASH3PC4AMC7 463 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 KCNK3O14649 394 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-230ENST00000557427 BCAT2O15382 392 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-230ENST00000557427 AP1G2O75843 785 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 KRT10P13645 584 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 UCHL3P15374 230 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 PFKLP17858 780 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 SLC9A1P19634 815 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 YWHAQP27348 245 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 ADORA2BP29275 332 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 FMO5P49326 533 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 MXI1P50539 228 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 GAD2Q05329 585 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 ENPEPQ07075 957 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 RAPGEF1Q13905 1077 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 LY6DQ14210 128 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 RTP5Q14D33 572 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 ASIC2Q16515 512 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 KIF19Q2TAC6 998 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 TAF1BQ53T94 588 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-230ENST00000557427 DCAF12L1Q5VU92 463 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 IL27RAQ6UWB1 636 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 FAM35AQ86V20 835 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 UNC93AQ86WB7 457 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 FUKQ8N0W3 1084 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 NUP93Q8N1F7 819 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
SHMT2-230ENST00000557427 HEXIM2Q96MH2 286 aaKnown RBP13.05□□□□□ -0.32
SHMT2-230ENST00000557427 TWNKQ96RR1 684 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms