RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GEN1Q17RS7 908 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 FNDC3BQ53EP0 1204 aaKnown RBP7.6□□□□□ -1.19
SCFD1-222ENST00000556768 TCP11X2Q5H9J9 407 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 FKBP15Q5T1M5 1219 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 STPG1Q5TH74 334 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 PIK3R6Q5UE93 754 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 DENND1BQ6P3S1 775 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 GJB7Q6PEY0 223 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 TMPRSS6Q8IU80 811 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 IRF2BP1Q8IU81 584 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 ZDHHC17Q8IUH5 632 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 MFN1Q8IWA4 741 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 FAM217AQ8IXS0 508 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 ATP6V0D2Q8N8Y2 350 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 HJURPQ8NCD3 748 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-222ENST00000556768 CLEC4CQ8WTT0 213 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 SIPA1Q96FS4 1042 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 PIWIL1Q96J94 861 aaKnown RBP7.6□□□□□ -1.19
SCFD1-222ENST00000556768 BTN2A3PQ96KV6 586 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 MRGPRX1Q96LB2 322 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 ZSWIM1Q9BR11 485 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 LHX5Q9H2C1 402 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 ABCB8Q9NUT2 735 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 STIM2Q9P246 746 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 NAALADL1Q9UQQ1 740 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 NFE2L3Q9Y4A8 694 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 PAXBP1Q9Y5B6 917 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 RAD54BQ9Y620 910 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 SDK1Q7Z5N4 2213 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 COL4A2P08572 1712 aa7.6□□□□□ -1.19
SCFD1-222ENST00000556768 ANTXRLA6NF34 631 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 H0Y626 953 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 FOXN3O00409 490 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 TBL1XO60907 577 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 RNASEH1O60930 286 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 HSF2BPO75031 334 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 TRUB2O95900 331 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 MOCS2O96007 188 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 CALCAP01258 141 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 DLDP09622 509 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 PABPC1P11940 636 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 HOXD9P28356 352 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 NNMTP40261 264 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 GFPT1Q06210 699 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF33AQ06730 810 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF234Q14588 700 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 TRIM61Q5EBN2 209 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 WDR45BQ5MNZ6 344 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 RNF219Q5W0B1 726 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 C11orf57Q6ZUT1 292 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 CHST9Q7L1S5 443 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 TMEM35BQ8NCS4 154 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ENOX1Q8TC92 643 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 DQX1Q8TE96 717 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 EDEM2Q9BV94 578 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 NUP58Q9BVL2 599 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 NAT10Q9H0A0 1025 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 SAP130Q9H0E3 1048 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 FAM204AQ9H8W3 233 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 TMEM9BQ9NQ34 198 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 LMBRD1Q9NUN5 540 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ANO10Q9NW15 660 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 DDIT4Q9NX09 232 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 RRN3Q9NYV6 651 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 SUN2Q9UH99 717 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 GGA2Q9UJY4 613 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 CYP8B1Q9UNU6 501 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 KCNU1A8MYU2 1149 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 F5H5T6 163 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 PAPSS1O43252 624 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 MBD3O95983 291 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 IGLV3-27P01718 113 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 CFIP05156 583 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 BCKDHBP21953 392 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 CD6P30203 668 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 HLA-FP30511 346 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 IL12RB1P42701 662 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 PTGER3P43115 390 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 EPHA4P54764 986 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 OXCT1P55809 520 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 DRAP1Q14919 205 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 DUOXA1Q1HG43 343 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 FUT11Q495W5 492 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 PPM1JQ5JR12 505 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 RABGAP1LQ5R372 815 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 KLHDC7AQ5VTJ3 777 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 OR6B2Q6IFH4 312 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 KIAA1211LQ6NV74 962 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 RFWD3Q6PCD5 774 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 SLC47A2Q86VL8 602 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 PASD1Q8IV76 773 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 FAM71AQ8IYT1 594 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 CARNMT1Q8N4J0 409 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 C1orf131Q8NDD1 294 aaKnown RBP7.59□□□□□ -1.19
SCFD1-222ENST00000556768 FIBINQ8TAL6 211 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 MARVELD3Q96A59 401 aa7.59□□□□□ -1.19
SCFD1-222ENST00000556768 ERLEC1Q96DZ1 483 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms