RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DYDC1Q8WWB3 177 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 OSBPL2Q9H1P3 480 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 MYO18AQ92614 2054 aaKnown RBP18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 DFFAO00273 331 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 OPHN1O60890 802 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 CPP00450 1065 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 TPSB2P20231 275 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 PTPN3P26045 913 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 MSH2P43246 934 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 TPSAB1Q15661 275 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 QPCTQ16769 361 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 ARHGAP36Q6ZRI8 547 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 C14orf80Q86SX3 495 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 MIB1Q86YT6 1006 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 MCUQ8NE86 351 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 SLC24A2Q9UI40 661 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 MAGED2Q9UNF1 606 aaPredicted RBP18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 PATJQ8NI35 1801 aa18.82■□□□□ 0.6
SDR39U1-220ENST00000556548 HMBSP08397 361 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 YWHAQP27348 245 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 FDFT1P37268 417 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 MAGEA11P43364 429 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 SESN2P58004 480 aaPredicted RBP18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 TAF10Q12962 218 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 GPR17Q13304 367 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 KLHL38Q2WGJ6 581 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 BRMS1LQ5PSV4 323 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 PACS2Q86VP3 889 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 CENPTQ96BT3 561 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 TMEM175Q9BSA9 504 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 TRABDQ9H4I3 376 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 PLAC1Q9HBJ0 212 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 NDFIP2Q9NV92 336 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 MPP6Q9NZW5 540 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 NEU3Q9UQ49 428 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 MYO16Q9Y6X6 1858 aa18.81■□□□□ 0.6
SDR39U1-220ENST00000556548 ZBTB24O43167 697 aaPredicted RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 FAM107AO95990 144 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 GARSP41250 739 aaKnown RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 ZBTB17Q13105 803 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 IKBKEQ14164 716 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 SPOUT1Q5T280 376 aaKnown RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 RASIP1Q5U651 963 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 CASC4Q6P4E1 433 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 USP33Q8TEY7 942 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 SIGLEC10Q96LC7 697 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 HAPLN3Q96S86 360 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 CYTH2Q99418 400 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 HS3ST4Q9Y661 456 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 TBC1D4O60343 1298 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 FAM155BO75949 473 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 SERPINB6P35237 376 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 TUBP50607 506 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 PPIDQ08752 370 aaKnown RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 ELAVL2Q12926 359 aaKnown RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 SMAD1Q15797 465 aaKnown RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 ANKS3Q6ZW76 656 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 CTAGE3PQ8IX95 158 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 DCAKDQ8WVC6 231 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 VWCEQ96DN2 955 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 SERPINB11Q96P15 392 aa18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 KLF6Q99612 283 aaPredicted RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 PAIP2Q9BPZ3 127 aaKnown RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 FRMD8Q9BZ67 464 aaPredicted RBP18.8■□□□□ 0.6
SDR39U1-220ENST00000556548 NUP205Q92621 2012 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 USP12O75317 370 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 MAGEA3P43357 314 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 GALNT2Q10471 571 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 PARP6Q2NL67 630 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 UNC5AQ6ZN44 842 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 FBXO22Q8NEZ5 403 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 VN1R3Q9BXE9 311 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 TTLL3Q9Y4R7 772 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 COL4A4P53420 1690 aaPredicted RBP18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 WDR27A2RRH5 827 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 CXorf49A8MYA2 514 aaPredicted RBP18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 KCNU1A8MYU2 1149 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 H7C4K7 107 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 GOLGA8RI6L899 631 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 TBX4P57082 545 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 ADGRD1Q6QNK2 874 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 CPLX4Q7Z7G2 160 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 PPM1NQ8N819 430 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 SPPL2BQ8TCT7 592 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 CHMP6Q96FZ7 201 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 CWH43Q9H720 699 aa18.79■□□□□ 0.6
SDR39U1-220ENST00000556548 ANKRD65E5RJM6 399 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 E9PAM4 449 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 NCAM2O15394 837 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 JCHAINP01591 159 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 HAPLN1P10915 354 aaPredicted RBP18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 MX2P20592 715 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 OR1D2P34982 312 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 SARNPP82979 210 aaKnown RBP18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 PPP2R5DQ14738 602 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 PSMD5Q16401 504 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 C10orf120Q5SQS8 335 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 PIK3R6Q5UE93 754 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 TRMT10BQ6PF06 316 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms