RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 TAF12Q16514 161 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 MEA1Q16626 185 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 CPSF6Q16630 551 aaKnown RBP eCLIP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 LIN9Q5TKA1 542 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 HEATR6Q6AI08 1181 aaKnown RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 PPP1R2P3Q6NXS1 205 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 RSPO2Q6UXX9 243 aaPredicted RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 TMEM184AQ6ZMB5 413 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 CCDC149Q6ZUS6 474 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 RBM23Q86U06 439 aaKnown RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 PASD1Q8IV76 773 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 SCN4BQ8IWT1 228 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 LRRC8AQ8IWT6 810 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 ANKRD52Q8NB46 1076 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 ATAD1Q8NBU5 361 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 TMEM35BQ8NCS4 154 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 UBA3Q8TBC4 463 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 SLC20A1Q8WUM9 679 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 PPP1R9BQ96SB3 815 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 SEPT5Q99719 369 aaPredicted RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 DUSP16Q9BY84 665 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 ZNF518BQ9C0D4 1074 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 PRDM14Q9GZV8 571 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 LHX5Q9H2C1 402 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 NHEJ1Q9H9Q4 299 aaPredicted RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 CYP4F11Q9HBI6 524 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 TMLHEQ9NVH6 421 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 AFF4Q9UHB7 1163 aaKnown RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 NOCTQ9UK39 431 aaKnown RBP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 SCN1AP35498 2009 aa8.01□□□□□ -1.13
SUPT16H-204ENST00000555943 MTMR11A4FU01 709 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 PER2O15055 1255 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 TGM5O43548 720 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 ABLIM3O94929 683 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 LSM8O95777 96 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 LRG1P02750 347 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 PLEKP08567 350 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 SETSIPP0DME0 302 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 ITIH2P19823 946 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 CYP2F1P24903 491 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 MAGEA11P43364 429 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 NSFP46459 744 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 KIF11P52732 1056 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 MAP3K7CLP57077 242 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 RPL10AP62906 217 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 FMO1Q01740 532 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 NHLH1Q02575 133 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 DUSP4Q13115 394 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 PLD1Q13393 1074 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 CBX2Q14781 532 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 VEPH1Q14D04 833 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 DUSP6Q16828 381 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 CCDC142Q17RM4 750 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 NKPD1Q17RQ9 610 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 CFAP221Q4G0U5 840 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 PRSS36Q5K4E3 855 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 E4F1Q66K89 784 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 DENND1BQ6P3S1 775 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 WDR59Q6PJI9 974 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 VSTM1Q6UX27 236 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 ZNF571Q7Z3V5 609 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 ADGRD2Q7Z7M1 963 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 CCDC170Q8IYT3 715 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 FUKQ8N0W3 1084 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 ELMOD1Q8N336 334 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 KREMEN2Q8NCW0 462 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 IPO4Q8TEX9 1081 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 DDX1Q92499 740 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 SECISBP2LQ93073 1101 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 TRIM44Q96DX7 344 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 PKMYT1Q99640 499 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 CHP1Q99653 195 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 PHF7Q9BWX1 381 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 MIS12Q9H081 205 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 LRRC4Q9HBW1 653 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 GP6Q9HCN6 339 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 DMAP1Q9NPF5 467 aaPredicted RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 LUC7LQ9NQ29 371 aaKnown RBP8□□□□□ -1.13
SUPT16H-204ENST00000555943 CLEC1BQ9P126 229 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 ARHGAP20Q9P2F6 1191 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 HSFX1Q9UBD0 423 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 FBXL21Q9UKT6 434 aa8□□□□□ -1.13
SUPT16H-204ENST00000555943 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 TMCO5BA8MYB1 307 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 LOC730098B7Z3J9 87 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 F8VP50 259 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 XPO1O14980 1071 aaKnown RBP7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 LINC01565O15544 149 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 ARHGAP6O43182 974 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 CLASP2O75122 1294 aaKnown RBP7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 GLP2RO95838 553 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 C1RP00736 705 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 SPATA31D3P0C874 917 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 HAPLN1P10915 354 aaPredicted RBP7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 GZMAP12544 262 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 CHRNB2P17787 502 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 CD247P20963 164 aa7.99□□□□□ -1.13
SUPT16H-204ENST00000555943 ACADSBP45954 432 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms