RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FLOT2Q14254 428 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 ZBTB41Q5SVQ8 909 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 FRA10AC1Q70Z53 315 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 COG8Q96MW5 612 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 VPS51Q9UID3 782 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 PRPF19Q9UMS4 504 aaKnown RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 hCG_1818297A0A087WSY0 165 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 A0A1W2PPW3 197 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 TRIM64CA6NLI5 447 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 SGK1O00141 431 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 RAD17O75943 681 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 FAM155BO75949 473 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 IREB2P48200 963 aaKnown RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 CDH15P55291 814 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 RSBN1LQ6PCB5 846 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 HPS1Q92902 700 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 NKD2Q969F2 451 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF597Q96LX8 424 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 IFT52Q9Y366 437 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 LOC100653049A0A140TA62 436 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 KRT34O76011 436 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 GABRB3P28472 473 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 BNIP3Q12983 259 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 OXA1LQ15070 435 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 SLC15A4Q8N697 577 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 PIWIL2Q8TC59 973 aaKnown RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 DLG3Q92796 817 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 MCEEQ96PE7 176 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 CDH19Q9H159 772 aa16.04■□□□□ 0.16
SYNE3-203ENST00000554873 SAE1Q9UBE0 346 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-203ENST00000554873 WDR81Q562E7 1941 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 C7orf72A4D263 438 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ITGAVP06756 1048 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 NELFEP18615 380 aaKnown RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 CDKN2BP42772 138 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 SP4Q02446 784 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 PEX6Q13608 980 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 TFDP3Q5H9I0 405 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 LRRC38Q5VT99 294 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ANKRD26P1Q6NSI1 321 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ARCQ7LC44 396 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ITIH5Q86UX2 942 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 C11orf74Q86VG3 221 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 FIBCD1Q8N539 461 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ADAMTS16Q8TE57 1224 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ERLEC1Q96DZ1 483 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 RTKNQ9BST9 563 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 KLHL25Q9H0H3 589 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 CYP26B1Q9NR63 512 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 SEPT9Q9UHD8 586 aaPredicted RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 TMA7Q9Y2S6 64 aaKnown RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 CORINQ9Y5Q5 1042 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 STYXL1Q9Y6J8 313 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 TCRBV5S1A1TA0A578 114 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 NOTOA8MTQ0 251 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 CYB561D2O14569 222 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 APOEP02649 317 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 BPGMP07738 259 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 CD247P20963 164 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 EPHA3P29320 983 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 MRPS5P82675 430 aaKnown RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 DPYSQ14117 519 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 TTC39BQ5VTQ0 682 aaPredicted RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ANKRD22Q5VYY1 191 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 PDPK2PQ6A1A2 396 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 TMEM102Q8N9M5 508 aaPredicted RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF641Q96N77 438 aaPredicted RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 TMEM79Q9BSE2 394 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 CXorf21Q9HAI6 301 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 SACM1LQ9NTJ5 587 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 RBAKQ9NYW8 714 aaPredicted RBP16.03■□□□□ 0.16
SYNE3-203ENST00000554873 PRELID1Q9Y255 219 aa16.03■□□□□ 0.16
SYNE3-203ENST00000554873 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.16
SYNE3-203ENST00000554873 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 TRIM49D1C9J1S8 452 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 COX4I1P13073 169 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 DCKP27707 260 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 TTKP33981 857 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 BBS9Q3SYG4 887 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 FGD3Q5JSP0 725 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.16
SYNE3-203ENST00000554873 PPP2R2DQ66LE6 453 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 DCUN1D2Q6PH85 259 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 CADM3Q8N126 398 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 SLC35B2Q8TB61 432 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 TANKQ92844 425 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 GMLQ99445 158 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 MROQ9BYG7 248 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 RIC8BQ9NVN3 520 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 QPCTLQ9NXS2 382 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 DAPK2Q9UIK4 370 aa16.02■□□□□ 0.16
SYNE3-203ENST00000554873 SCAF8Q9UPN6 1271 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms