RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 GAB1Q13480 694 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 SIM2Q14190 667 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 TRIM60Q495X7 471 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF569Q5MCW4 686 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 MIS18BP1Q6P0N0 1132 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 RANBP10Q6VN20 620 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 OR4N4Q8N0Y3 316 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 TMEM57Q8N5G2 664 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 LINS1Q8NG48 757 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 OR52L2PQ8NGH6 319 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 GLMPQ8WWB7 406 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 HERVK_113Q902F9 699 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 CPT1BQ92523 772 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 SMG7Q92540 1137 aaKnown RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 RSC1A1Q92681 617 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 STAMQ92783 540 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 REXO5Q96IC2 774 aaKnown RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 EFHD1Q9BUP0 239 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 SLC26A6Q9BXS9 759 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 ADGRE3Q9BY15 652 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 SLC29A3Q9BZD2 475 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 ARHGAP39Q9C0H5 1083 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 ABHD16BQ9H3Z7 469 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 PLEKHA2Q9HB19 425 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 SMC4Q9NTJ3 1288 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 RNF7Q9UBF6 113 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 GJD2Q9UKL4 321 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 TRPC5Q9UL62 973 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 RCE1Q9Y256 329 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 UBE2J1Q9Y385 318 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 RRP7AQ9Y3A4 280 aaKnown RBP3.5□□□□□ -1.85
SCFD1-213ENST00000554776 PCDHA10Q9Y5I2 948 aa3.5□□□□□ -1.85
SCFD1-213ENST00000554776 LMTK3Q96Q04 1460 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 FAM90A20PA6NIJ5 464 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 EFCAB8A8MWE9 144 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 E5RJQ4 531 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 PRYO14603 147 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 HEXIM1O94992 359 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 CD4P01730 458 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 LMO1P25800 156 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 NDUFS1P28331 727 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 ARHGAP25P42331 645 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 LIFRP42702 1097 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 TBX2Q13207 712 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 KLF9Q13886 244 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF268Q14587 947 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 KPNB1Q14974 876 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 AAK1Q2M2I8 961 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF484Q5JVG2 852 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 LRCH2Q5VUJ6 765 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 ZNF425Q6IV72 752 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 C11orf87Q6NUJ2 197 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 SLC2A7Q6PXP3 512 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 KIAA1324Q6UXG2 1013 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 KYAT3Q6YP21 454 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 TFAP2DQ7Z6R9 452 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 NAXEQ8NCW5 288 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 CLEC4CQ8WTT0 213 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 IGFBPL1Q8WX77 278 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 HTRA1Q92743 480 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 RPL36ALQ969Q0 106 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 HVCN1Q96D96 273 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 RRP36Q96EU6 259 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 TWNKQ96RR1 684 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 SEC62Q99442 399 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 FAM118BQ9BPY3 351 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 HERC2P3Q9BVR0 1158 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 GATA5Q9BWX5 397 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 TWSG1Q9GZX9 223 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 G6PC2Q9NQR9 355 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 TLR8Q9NR97 1041 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 LIN7CQ9NUP9 197 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 FBXO28Q9NVF7 368 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 NDUFAF4Q9P032 175 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 KLHL13Q9P2N7 655 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 PGAP2Q9UHJ9 254 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 NFU1Q9UMS0 254 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 SLC12A4Q9UP95 1085 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 DNAJC16Q9Y2G8 782 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 ZBTB1Q9Y2K1 713 aa3.49□□□□□ -1.85
SCFD1-213ENST00000554776 SETD1BQ9UPS6 1966 aaKnown RBP3.49□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3DA0A087WVF3 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3IA0A087WXS9 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3EA0A087X179 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3KA0A087X1G2 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3BA6NDS4 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3FA6NER0 549 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 KCNU1A8MYU2 1149 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TBC1D3LB9A6J9 549 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 RRHO14718 337 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 DSCR3O14972 297 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 TP73O15350 636 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 HOXC11O43248 304 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-213ENST00000554776 RNF8O76064 485 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 MBD4O95243 580 aa3.48□□□□□ -1.85
SCFD1-213ENST00000554776 LARGE1O95461 756 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms