RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 KRT82Q9NSB4 513 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 TMEM216Q9P0N5 145 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 E7ENQ6 273 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 NRP1O14786 923 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 GSRP00390 522 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 AMHP03971 560 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 C6orf222P0C671 652 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 FGF3P11487 239 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 ATP6V1C1P21283 382 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 SAT1P21673 171 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 VHLP40337 213 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 PGGT1BP53609 377 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 SNX17Q15036 470 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 MBLAC2Q68D91 279 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 ANO7Q6IWH7 933 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 TMPRSS6Q8IU80 811 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 WDR75Q8IWA0 830 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 SCUBE1Q8IWY4 988 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 FCRL3Q96P31 734 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 AGAP2Q99490 1192 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 FERMT1Q9BQL6 677 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 DUSP16Q9BY84 665 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 CAB39LQ9H9S4 337 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 PLXNB2O15031 1838 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 RRN3P2A6NIE6 340 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 MEIS3P2A8K0S8 358 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 HACD1B0YJ81 288 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF487B1APH4 448 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PLIN3O60664 434 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 OPHN1O60890 802 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 GLRA3O75311 464 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 BAG2O95816 211 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 NPR3P17342 541 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC25A3Q00325 362 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PEX6Q13608 980 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ITGA9Q13797 1035 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PDK1Q15118 436 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 SV2CQ496J9 727 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 LRRC74BQ6ZQY2 392 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ARHGAP24Q8N264 748 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 KCNK16Q96T55 309 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ANLNQ9NQW6 1124 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 MKS1Q9NXB0 559 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 IPPQ9Y573 584 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ARHGAP42A6NI28 874 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 BIRC5O15392 142 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 TPH1P17752 444 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PTPN1P18031 435 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 BEX3Q00994 111 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 BLMHQ13867 455 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PCLAFQ15004 111 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 TEDDM1Q5T9Z0 273 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 STEAP4Q687X5 459 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 CAPRIN2Q6IMN6 1127 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 KYAT3Q6YP21 454 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 LMNTD2Q8IXW0 634 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PIWIL2Q8TC59 973 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 EDEM1Q92611 657 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 MOCOSQ96EN8 888 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 TTC1Q99614 292 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 CCDC106Q9BWC9 280 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 ABHD16BQ9H3Z7 469 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC24A3Q9HC58 644 aa16.09■□□□□ 0.17
ARHGEF40-203ENST00000554514 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 DAB1O75553 588 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 CIB2O75838 187 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 SMNDC1O75940 238 aaKnown RBP eCLIP16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 POLBP06746 335 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 ERCC2P18074 760 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC34A1Q06495 639 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 DLG2Q15700 870 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 RIPOR1Q6ZS17 1223 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 ULK2Q8IYT8 1036 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 APBB2Q92870 758 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 PPP1R36Q96LQ0 422 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 OXCT2Q9BYC2 517 aaPredicted RBP16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.17
ARHGEF40-203ENST00000554514 YJEFN3A6XGL0 299 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 ALDH1A2O94788 518 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 MYL3P08590 195 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 USP17L7P0C7H9 530 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 NOS2P35228 1153 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 C1orf146Q5VVC0 180 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 PAQR9Q6ZVX9 377 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 EFCAB3Q8N7B9 438 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 PPP4R1Q8TF05 950 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 UCMAQ8WVF2 138 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 CERS2Q96G23 380 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 ZNF333Q96JL9 665 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 RHOBTB2Q9BYZ6 727 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 RPL26L1Q9UNX3 145 aaKnown RBP16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 TRIP12Q14669 1992 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 STRNO43815 780 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms