RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CPA5Q8WXQ8 436 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 NT5C3BQ969T7 300 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 MYEOVQ96EZ4 313 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 PGAP3Q96FM1 320 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-211ENST00000554310 ZNF830Q96NB3 372 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-211ENST00000554310 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
SHMT2-211ENST00000554310 SEMA4GQ9NTN9 838 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 PIGVQ9NUD9 493 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 STIM2Q9P246 746 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 DMXL1Q9Y485 3027 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 A0A1B0GTH6 734 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 A0A1B0GVM2 712 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 TCAF2A6NFQ2 919 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 PRR5-ARHGAP8B1AHC4 643 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 WASH3PC4AMC7 463 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 GOLGA8SH3BPF8 625 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 TEX33O43247 280 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 SYNCRIPO60506 623 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 ASLP04424 464 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 ATP5BP06576 529 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 DLDP09622 509 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 FERP16591 822 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 POLR2EP19388 210 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 BCKDHBP21953 392 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 PRKCHP24723 683 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 FLT3P36888 993 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 NSFP46459 744 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 GSDMDP57764 484 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 RNASE9P60153 205 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 ARHGAP8P85298 464 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 FANCCQ00597 558 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 LMAN2Q12907 356 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 FUT11Q495W5 492 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 FNDC3BQ53EP0 1204 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 SPDYCQ5MJ68 293 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 CARNMT1Q8N4J0 409 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 KIAA1524Q8TCG1 905 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 SORCS1Q8WY21 1168 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 LMLNQ96KR4 655 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 MRGPRX1Q96LB2 322 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 C11orf70Q9BRQ4 267 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 XPO4Q9C0E2 1151 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 FBRSQ9HAH7 460 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 IFNKQ9P0W0 207 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 TMEM59LQ9UK28 342 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 INVSQ9Y283 1065 aa13.5□□□□□ -0.25
SHMT2-211ENST00000554310 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
SHMT2-211ENST00000554310 H0Y626 953 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 MAP3K13O43283 966 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 PAGE1O75459 146 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 MOCS3O95396 460 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 CALB1P05937 261 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 EPHX1P07099 455 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 UNGP13051 313 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 SDHBP21912 280 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 MPLP40238 635 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 CXCR3P49682 368 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 OXCT1P55809 520 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 GSCP56915 257 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 DEUP1Q05D60 604 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 PTPRNQ16849 979 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 CLEC16AQ2KHT3 1053 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 C2CD6Q53TS8 623 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 PLA2G2CQ5R387 149 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 ACBD5Q5T8D3 534 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 FBXL22Q6P050 247 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 KIAA1324Q6UXG2 1013 aaKnown RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 SLC36A4Q6YBV0 504 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 PRR23CQ6ZRP0 262 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 LPCAT2Q7L5N7 544 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 PHF13Q86YI8 300 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 RLN3Q8WXF3 142 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 TTC17Q96AE7 1141 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 ARRDC1-AS1Q9H2J1 176 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 TMEM245Q9H330 911 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 METTL5Q9NRN9 209 aaKnown RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 VPS45Q9NRW7 570 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 SPTLC3Q9NUV7 552 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 ARHGEF38Q9NXL2 777 aa13.49□□□□□ -0.25
SHMT2-211ENST00000554310 KIAA1522Q9P206 1035 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-211ENST00000554310 FAM170AA1A519 330 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 BCLAF3A2AJT9 711 aaKnown RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 SERPINC1P01008 464 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 ZNF806P0C7X5 589 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 TFE3P19532 575 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 RDXP35241 583 aaKnown RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 CSKP41240 450 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 DPP6P42658 865 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 CREB5Q02930 508 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 SLC12A1Q13621 1099 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 AUHQ13825 339 aaKnown RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 PITRM1Q5JRX3 1037 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 CYP2U1Q7Z449 544 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
SHMT2-211ENST00000554310 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
SHMT2-211ENST00000554310 KDM1BQ8NB78 822 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms