RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	UPK3BL1	B0FP48	263 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	UPK3BL2	E5RIL1	263 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	IRAK2	O43187	625 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	SIN3B	O75182	1162 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	GRAP2	O75791	330 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	LUC7L3	O95232	432 aa	Known RBP	11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	TRUB2	O95900	331 aa	Known RBP	11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	IGLV3-25	P01717	112 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	OXTR	P30559	389 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	GGCX	P38435	758 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CSNK1E	P49674	416 aa	Known RBP	11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	IRAK1	P51617	712 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CDH18	Q13634	790 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	PITRM1	Q5JRX3	1037 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	MPP7	Q5T2T1	576 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CHSY1	Q86X52	802 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	NAXD	Q8IW45	347 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	DHX40	Q8IX18	779 aa	Known RBP	11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	APCDD1	Q8J025	514 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CHCHD4	Q8N4Q1	142 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	PNPLA1	Q8N8W4	532 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	FIBIN	Q8TAL6	211 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CPXM1	Q96SM3	734 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	GAREM1	Q9H706	876 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	SIX2	Q9NPC8	291 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	COX16	Q9P0S2	106 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	KIAA1468	Q9P260	1216 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	ZMIZ1	Q9ULJ6	1067 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	DMXL2	Q8TDJ6	3036 aa		11.91	□□□□□ -0.5
TUBA1B-208	ENST00000552984	FAM208B	Q5VWN6	2430 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	FREM2	Q5SZK8	3169 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	MYLK	Q15746	1914 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	ZFYVE26	Q68DK2	2539 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	TTC34	A8MYJ7	566 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CAPN9	O14815	690 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	FSBP	O95073	299 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	SEMA4F	O95754	770 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	APOE	P02649	317 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	ATP5B	P06576	529 aa	Known RBP	11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	VAV1	P15498	845 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	TACR2	P21452	398 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	STK19	P49842	368 aa	Predicted RBP	11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	CENPC	Q03188	943 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	HSP90AA4P	Q58FG1	418 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	KCNT1	Q5JUK3	1230 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	WDTC1	Q8N5D0	677 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	C1orf131	Q8NDD1	294 aa	Known RBP	11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	AZIN2	Q96A70	460 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	TTC17	Q96AE7	1141 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	BIRC7	Q96CA5	298 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	FAM204A	Q9H8W3	233 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	PLCB1	Q9NQ66	1216 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	APEX2	Q9UBZ4	518 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	RWDD2A	Q9UIY3	292 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	ERVW-1	Q9UQF0	538 aa		11.9	□□□□□ -0.5
TUBA1B-208	ENST00000552984	TYW5	A2RUC4	315 aa	Known RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	FAM47DP	A6NHR8	397 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	KCNK3	O14649	394 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	MID1	O15344	667 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	SART1	O43290	800 aa	Known RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	MED7	O43513	233 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	DNTT	P04053	509 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	FTH1P19	P0C7X4	201 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	PON1	P27169	355 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	MATK	P42679	507 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	ACADSB	P45954	432 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	NNT	Q13423	1086 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	E2F5	Q15329	346 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	TRIP6	Q15654	476 aa	Known RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	KIF19	Q2TAC6	998 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	HLA-B	Q31612	363 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	TTC31	Q49AM3	519 aa	Predicted RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	ZNF776	Q68DI1	518 aa	Predicted RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	FAM183BP	Q6ZVS7	135 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	TMEM110	Q86TL2	294 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	MMAA	Q8IVH4	418 aa	Known RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	DEFB106A	Q8N104	65 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	GANC	Q8TET4	914 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	STK32A	Q8WU08	396 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	SHC3	Q92529	594 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	RPL10L	Q96L21	214 aa	Known RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	ORAI3	Q9BRQ5	295 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	BTBD1	Q9H0C5	482 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	PABPC3	Q9H361	631 aa	Known RBP	11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	POPDC2	Q9HBU9	364 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	TM9SF3	Q9HD45	589 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	SLCO3A1	Q9UIG8	710 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	BTBD3	Q9Y2F9	522 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	NFE2L3	Q9Y4A8	694 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	SNX11	Q9Y5W9	270 aa		11.89	□□□□□ -0.51
TUBA1B-208	ENST00000552984	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984		A0A1W2PP55	124 aa		11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984		H0Y626	953 aa		11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984	PLK4	O00444	970 aa		11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984	CBFA2T3	O75081	653 aa		11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984	FGFR1OP	O95684	399 aa	Known RBP	11.88	□□□□□ -0.51
TUBA1B-208	ENST00000552984	ERBB2	P04626	1255 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms