RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 GPD1P21695 349 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 CCR1P32246 355 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ATXN1P54253 815 aaKnown RBP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 GAD2Q05329 585 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 KDSRQ06136 332 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 NNTQ13423 1086 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 MAMLD1Q13495 774 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SLC18A3Q16572 532 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ADGRF1Q5T601 910 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SH3PXD2AQ5TCZ1 1133 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 RAD9BQ6WBX8 426 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 OTUD6BQ8N6M0 293 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 KIAA1958Q8N8K9 716 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ATP6V0D2Q8N8Y2 350 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 NOA1Q8NC60 698 aaKnown RBP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SGSM3Q96HU1 749 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ISCUQ9H1K1 167 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 WDCPQ9H6R7 721 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 MRPS17Q9Y2R5 130 aaKnown RBP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SIT1Q9Y3P8 196 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SSU72P8A0A1W2PR75 194 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 H0YHG0 523 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 AGPSO00116 658 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 OPA1O60313 960 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ACSL4O60488 711 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 RASSF9O75901 435 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 MYBL1P10243 752 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 GLULP15104 373 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 DESP17661 470 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 GGCXP38435 758 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SLC6A11P48066 632 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 GALCP54803 685 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 STARD6P59095 220 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 RAB6CQ53S08 254 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 OTUD1Q5VV17 481 aaPredicted RBP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 RAP1GAP2Q684P5 730 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SCYL2Q6P3W7 929 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 TAX1BP1Q86VP1 789 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 CHSY1Q86X52 802 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 FAM131BQ86XD5 332 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 FAM172AQ8WUF8 416 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SLC39A13Q96H72 371 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 BTN2A3PQ96KV6 586 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 P2RY13Q9BPV8 354 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 TKTL2Q9H0I9 626 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SIK2Q9H0K1 926 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 RAB6CQ9H0N0 254 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 ACTR5Q9H9F9 607 aaPredicted RBP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 LTB4R2Q9NPC1 389 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 LZTFL1Q9NQ48 299 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 DNAJC17Q9NVM6 304 aaKnown RBP10.29□□□□□ -0.76
LETMD1-234ENST00000552645 STIM2Q9P246 746 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 SCINQ9Y6U3 715 aa10.29□□□□□ -0.76
LETMD1-234ENST00000552645 KIAA1549LQ6ZVL6 1849 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 MYO18AQ92614 2054 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 TCRBV5S1A1TA0A578 114 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 ANKRD33BA6NCL7 494 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 GOLGA6BA6NDN3 693 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 SOWAHDA6NJG2 315 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 KCNU1A8MYU2 1149 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 PI15O43692 258 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 PSMA2P25787 234 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 TARSP26639 723 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 SLC6A4P31645 630 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 GALK1P51570 392 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 GNGT1P63211 74 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 GRSF1Q12849 480 aaKnown RBP eCLIP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 FAM133BQ5BKY9 247 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 EMC10Q5UCC4 262 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 CWF19L1Q69YN2 538 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 ASTLQ6HA08 431 aaPredicted RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 NADSYN1Q6IA69 706 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 PLEKHA7Q6IQ23 1121 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 ARCQ7LC44 396 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 LGI2Q8N0V4 545 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 CFAP52Q8N1V2 620 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 FBXL6Q8N531 539 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 PJA1Q8NG27 643 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 CTNNBL1Q8WYA6 563 aaPredicted RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 CD101Q93033 1021 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 NT5C3BQ969T7 300 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 TMA16Q96EY4 203 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 MSANTD3Q96H12 275 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 XPO6Q96QU8 1125 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 DDX50Q9BQ39 737 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 PACSIN1Q9BY11 444 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 IRX2Q9BZI1 471 aaPredicted RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 FBRSL1Q9HCM7 1045 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 MRPL47Q9HD33 250 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 KLC4Q9NSK0 619 aa10.28□□□□□ -0.76
LETMD1-234ENST00000552645 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
LETMD1-234ENST00000552645 TYW5A2RUC4 315 aaKnown RBP10.27□□□□□ -0.77
LETMD1-234ENST00000552645 SHISA7A6NL88 538 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms