RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 OCMP0CE72 109 aaPredicted RBP12.54□□□□□ -0.4
ERBB3-219ENST00000551242 IDO1P14902 403 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 ME2P23368 584 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 IKBKEQ14164 716 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 CARM1Q86X55 608 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 PQLC3Q8N755 202 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 ZDHHC15Q96MV8 337 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 TARS2Q9BW92 718 aaKnown RBP12.54□□□□□ -0.4
ERBB3-219ENST00000551242 POLR3FQ9H1D9 316 aaPredicted RBP12.54□□□□□ -0.4
ERBB3-219ENST00000551242 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 GABBR1Q9UBS5 961 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 UBIAD1Q9Y5Z9 338 aa12.54□□□□□ -0.4
ERBB3-219ENST00000551242 RGSL1A5PLK6 1076 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 K7EPI3 171 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 E2F6O75461 281 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 ATE1O95260 518 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 ERBB2P04626 1255 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 GLDCP23378 1020 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CCR10P46092 362 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 TXNL4AP83876 142 aaKnown RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 GPR180Q86V85 440 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 PLD5Q8N7P1 536 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CIB1Q99828 191 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 MSTO1Q9BUK6 570 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 BRD8Q9H0E9 1235 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 DBNDD1Q9H9R9 158 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CCPG1Q9ULG6 757 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 BCAS2O75934 225 aaPredicted RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 ZBTB11O95625 1053 aaPredicted RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 ALDH2P05091 517 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CHRNGP07510 517 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 TYK2P29597 1187 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CLCN2P51788 898 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 C15orf59Q2T9L4 293 aaPredicted RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CCDC92Q53HC0 331 aaPredicted RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 GPR141Q7Z602 305 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CPXCR1Q8N123 301 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 PLD6Q8N2A8 252 aaKnown RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 FAM47BQ8NA70 645 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 PGLYRP2Q96PD5 576 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 PCDHAC1Q9H158 963 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 TRPV6Q9H1D0 765 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
ERBB3-219ENST00000551242 MOCS1Q9NZB8 636 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 DCDC2Q9UHG0 476 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 SNX13Q9Y5W8 968 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
ERBB3-219ENST00000551242 ACOT8O14734 319 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 CD247P20963 164 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 MTX3Q5HYI7 312 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 ZNF362Q5T0B9 420 aaPredicted RBP12.52□□□□□ -0.4
ERBB3-219ENST00000551242 BSPRYQ5W0U4 402 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 NANOGP8Q6NSW7 305 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 ZNF597Q96LX8 424 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 NPAS2Q99743 824 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 ZNF518BQ9C0D4 1074 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 MTMR12Q9C0I1 747 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 TDRD3Q9H7E2 651 aaKnown RBP12.52□□□□□ -0.4
ERBB3-219ENST00000551242 CYP26B1Q9NR63 512 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.4
ERBB3-219ENST00000551242 FBXO40Q9UH90 709 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 PCDHB12Q9Y5F1 795 aa12.52□□□□□ -0.4
ERBB3-219ENST00000551242 A0A1W2PPW3 197 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 J3QRK9 145 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 GRAP2O75791 330 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 ASS1P00966 412 aaKnown RBP12.52□□□□□ -0.41
ERBB3-219ENST00000551242 CAPNS1P04632 268 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 EDN1P05305 212 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 MPSTP25325 297 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 TNFSF9P41273 254 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 MAGEA3P43357 314 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 GJA8P48165 433 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 CD151P48509 253 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 BCAP31P51572 246 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 HSD17B4P51659 736 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 BCAR1P56945 870 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 ART3Q13508 389 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 LSM12Q3MHD2 195 aaKnown RBP12.52□□□□□ -0.41
ERBB3-219ENST00000551242 STXBP5Q5T5C0 1151 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 XYLT1Q86Y38 959 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 FBXL8Q96CD0 374 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 TAAR1Q96RJ0 339 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 NEURL2Q9BR09 285 aa12.52□□□□□ -0.41
ERBB3-219ENST00000551242 FRMD8Q9BZ67 464 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms