RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MDM4O15151 490 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 FSBPO95073 299 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 KLKB1P03952 638 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 IGHV4-34P06331 123 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 ITGAVP06756 1048 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 RALAP11233 206 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 CHKAP35790 457 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 UBE2HP62256 183 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 RACK1P63244 317 aaKnown RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 CAMK2GQ13555 558 aaPredicted RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 E2F5Q15329 346 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 CBWD6Q4V339 395 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 RAB41Q5JT25 222 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 CBWD3Q5JTY5 395 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 CBWD5Q5RIA9 395 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 PRAMEF14Q5SWL7 426 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 FYB2Q5VWT5 728 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 TTI2Q6NXR4 508 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 ADAT2Q7Z6V5 191 aaKnown RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 CCDC150Q8NCX0 1101 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 OR2T3Q8NH03 318 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 TATDN2Q93075 761 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 ZNF578Q96N58 590 aaPredicted RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 ACE2Q9BYF1 805 aaPredicted RBP12.72□□□□□ -0.37
DDX54-206ENST00000549271 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 ELOVL2Q9NXB9 296 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 NUDT5Q9UKK9 219 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 COQ4Q9Y3A0 265 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 AHCTF1Q8WYP5 2266 aa12.72□□□□□ -0.37
DDX54-206ENST00000549271 PSMA7O14818 248 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 STX10O60499 249 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 EPHX1P07099 455 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 CD58P19256 250 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 ABCB4P21439 1286 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 MXI1P50539 228 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 BCAT1P54687 386 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 C21orf59P57076 290 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 INSM1Q01101 510 aaPredicted RBP12.71□□□□□ -0.37
DDX54-206ENST00000549271 VAC14Q08AM6 782 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 STIM1Q13586 685 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 EIF4HQ15056 248 aaKnown RBP12.71□□□□□ -0.37
DDX54-206ENST00000549271 ARHGAP17Q68EM7 881 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 DHX40Q8IX18 779 aaKnown RBP12.71□□□□□ -0.37
DDX54-206ENST00000549271 FAM217AQ8IXS0 508 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 ARHGAP18Q8N392 663 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 CPXM2Q8N436 756 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 NELFBQ8WX92 580 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 SLC35C1Q96A29 364 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 JAKMIP2Q96AA8 810 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 BTBD1Q9H0C5 482 aa12.71□□□□□ -0.37
DDX54-206ENST00000549271 YKT6O15498 198 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 DXOO77932 396 aaKnown RBP12.7□□□□□ -0.38
DDX54-206ENST00000549271 WNT1P04628 370 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 KRT10P13645 584 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 CKMT2P17540 419 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
DDX54-206ENST00000549271 PPP1R2P41236 205 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 TCERG1LQ5VWI1 586 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 TMEM215Q68D42 235 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 FOXR2Q6PJQ5 311 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 SERPINA13PQ6UXR4 307 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 PRICKLE2Q7Z3G6 844 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 ANKS1BQ7Z6G8 1248 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 SLC4A11Q8NBS3 891 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 SORCS1Q8WY21 1168 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 SLC2A11Q9BYW1 496 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 SGK2Q9HBY8 427 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
DDX54-206ENST00000549271 ARMCX3Q9UH62 379 aaPredicted RBP12.7□□□□□ -0.38
DDX54-206ENST00000549271 AGO1Q9UL18 857 aaKnown RBP12.7□□□□□ -0.38
DDX54-206ENST00000549271 MYO9AB2RTY4 2548 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 A0A1W2PPC4 97 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
DDX54-206ENST00000549271 ACP1P24666 158 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 CORO1AP31146 461 aaKnown RBP12.69□□□□□ -0.38
DDX54-206ENST00000549271 RAD23BP54727 409 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 STX17P56962 302 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 ZBTB16Q05516 673 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 CAMK4Q16566 473 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 DCAF17Q5H9S7 520 aaPredicted RBP12.69□□□□□ -0.38
DDX54-206ENST00000549271 KIAA0895LQ68EN5 471 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 PIGZQ86VD9 579 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 KCNE4Q8WWG9 221 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 HEXIM2Q96MH2 286 aaKnown RBP12.69□□□□□ -0.38
DDX54-206ENST00000549271 SLC6A18Q96N87 628 aa12.69□□□□□ -0.38
DDX54-206ENST00000549271 MED15Q96RN5 788 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms